MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:180891543-180931571

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi12907	2	180890601 to 180891807	1206		CpG island	CpG island 12907
Cpgi12908	2	180892453 to 180894923	2470		CpG island	CpG island 12908
Tssr28138	2	180892931 to 180892939	8	-	TSS region	transcription start site region 28138
Tssr22278	2	180893121 to 180893138	17	+	TSS region	transcription start site region 22278
Tssr28139	2	180893401 to 180893404	3	-	TSS region	transcription start site region 28139
Tssr28140	2	180893408 to 180893422	14	-	TSS region	transcription start site region 28140
Mir124a-3	2	180894040 to 180894107	67	+	miRNA gene	microRNA 124a-3
Gm27032	2	180894105 to 180895220	1115	+	lincRNA gene	predicted gene, 27032
Ythdf1	2	180904377 to 180920936	16559	-	protein coding gene	YTH N6-methyladenosine RNA binding protein 1
Tssr28141	2	180909823 to 180909827	4	-	TSS region	transcription start site region 28141
Tssr28142	2	180911543 to 180911571	28	-	TSS region	transcription start site region 28142
Cpgi12909	2	180920189 to 180921463	1274		CpG island	CpG island 12909
Tssr28143	2	180920889 to 180920923	34	-	TSS region	transcription start site region 28143
Tssr28144	2	180920925 to 180920964	39	-	TSS region	transcription start site region 28144
Tssr28145	2	180920995 to 180921010	15	-	TSS region	transcription start site region 28145
Tssr28146	2	180921015 to 180921022	7	-	TSS region	transcription start site region 28146
Tssr22279	2	180929000 to 180929046	46	+	TSS region	transcription start site region 22279
Birc7	2	180929023 to 180934010	4987	+	protein coding gene	baculoviral IAP repeat-containing 7 (livin)