Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:180596796-180646803

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi12900 2 180598072 to 180598703 631 CpG island CpG island 12900
Col9a3 2 180598102 to 180622185 24083 + protein coding gene collagen, type IX, alpha 3
Tssr22254 2 180598219 to 180598226 7 + TSS region transcription start site region 22254
Tssr22255 2 180598227 to 180598251 24 + TSS region transcription start site region 22255
Tssr22256 2 180601039 to 180601041 2 + TSS region transcription start site region 22256
Tssr22257 2 180604099 to 180604145 46 + TSS region transcription start site region 22257
Tssr22258 2 180604882 to 180604896 14 + TSS region transcription start site region 22258
Tssr807 2 180621796 to 180621803 7 - TSS region transcription start site region 807
Tcfl5 2 180621956 to 180642702 20746 - protein coding gene transcription factor-like 5 (basic helix-loop-helix)
Tssr22259 2 180635090 to 180635121 31 + TSS region transcription start site region 22259
Cpgi12901 2 180641656 to 180643141 1485 CpG island CpG island 12901
Tssr28115 2 180642279 to 180642288 9 - TSS region transcription start site region 28115
Tssr28116 2 180642306 to 180642315 9 - TSS region transcription start site region 28116
Tssr28117 2 180642317 to 180642335 18 - TSS region transcription start site region 28117
Gm30345 2 180642428 to 180665994 23566 + lncRNA gene predicted gene, 30345
Tssr28118 2 180642602 to 180642625 23 - TSS region transcription start site region 28118
Tssr28119 2 180642626 to 180642639 13 - TSS region transcription start site region 28119
Tssr28120 2 180642651 to 180642664 13 - TSS region transcription start site region 28120
Tssr28121 2 180642681 to 180642757 76 - TSS region transcription start site region 28121