MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:180561199-180601219

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm30144	2	180545080 to 180581121	36041	-	lncRNA gene	predicted gene, 30144
Tssr22248	2	180581199 to 180581219	20	+	TSS region	transcription start site region 22248
Tssr22249	2	180581220 to 180581243	23	+	TSS region	transcription start site region 22249
Mrgbp	2	180581304 to 180586304	5000	+	protein coding gene	MRG/MORF4L binding protein
Cpgi12898	2	180582459 to 180583515	1056		CpG island	CpG island 12898
Tssr22250	2	180582726 to 180582742	16	+	TSS region	transcription start site region 22250
Tssr22251	2	180582750 to 180582777	27	+	TSS region	transcription start site region 22251
Tssr22252	2	180582780 to 180582798	18	+	TSS region	transcription start site region 22252
Cpgi12899	2	180589019 to 180590029	1010		CpG island	CpG island 12899
Tssr28114	2	180589346 to 180589397	51	-	TSS region	transcription start site region 28114
Ogfr	2	180589375 to 180595837	6462	+	protein coding gene	opioid growth factor receptor
Tssr22253	2	180589423 to 180589479	56	+	TSS region	transcription start site region 22253
Tssr806	2	180589766 to 180589787	21	+	TSS region	transcription start site region 806
Cpgi12900	2	180598072 to 180598703	631		CpG island	CpG island 12900
Col9a3	2	180598102 to 180622185	24083	+	protein coding gene	collagen, type IX, alpha 3
Tssr22254	2	180598219 to 180598226	7	+	TSS region	transcription start site region 22254
Tssr22255	2	180598227 to 180598251	24	+	TSS region	transcription start site region 22255
Tssr22256	2	180601039 to 180601041	2	+	TSS region	transcription start site region 22256