Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:18048864-18336586

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Skida1 2 18040676 to 18049051 8375 - protein coding gene SKI/DACH domain containing 1
Tssr16356 2 18049003 to 18049027 24 + TSS region transcription start site region 16356
Tssr22781 2 18050981 to 18050987 6 - TSS region transcription start site region 22781
1810059C17Rik 2 18054193 to 18056613 2420 - unclassified non-coding RNA gene RIKEN cDNA 1810059C17 gene
Tssr16357 2 18055172 to 18055202 30 + TSS region transcription start site region 16357
Tssr16358 2 18055203 to 18055221 18 + TSS region transcription start site region 16358
Mllt10 2 18055237 to 18212388 157151 + protein coding gene myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
Tssr16359 2 18055704 to 18055733 29 + TSS region transcription start site region 16359
Tssr22782 2 18055981 to 18055990 9 - TSS region transcription start site region 22782
Cpgi11234 2 18056140 to 18058054 1914 CpG island CpG island 11234
Tssr16360 2 18057128 to 18057145 17 + TSS region transcription start site region 16360
Gm39762 2 18057572 to 18064241 6669 - lncRNA gene predicted gene, 39762
Mir7655 2 18057846 to 18057903 57 + miRNA gene microRNA 7655
Tssr16361 2 18063891 to 18063913 22 + TSS region transcription start site region 16361
Cpgi11235 2 18063915 to 18065862 1947 CpG island CpG island 11235
Tssr16362 2 18064319 to 18064330 11 + TSS region transcription start site region 16362
Tssr16363 2 18064340 to 18064348 8 + TSS region transcription start site region 16363
Tssr16364 2 18064356 to 18064408 52 + TSS region transcription start site region 16364
Tssr16365 2 18064416 to 18064429 13 + TSS region transcription start site region 16365
Tssr16366 2 18064564 to 18064644 80 + TSS region transcription start site region 16366
Tssr16367 2 18064645 to 18064705 60 + TSS region transcription start site region 16367
Tssr16368 2 18064710 to 18064722 12 + TSS region transcription start site region 16368
Tssr16369 2 18064792 to 18064816 24 + TSS region transcription start site region 16369
Tssr16370 2 18073939 to 18073943 4 + TSS region transcription start site region 16370
Tssr16371 2 18086273 to 18086275 2 + TSS region transcription start site region 16371
Tssr16372 2 18105705 to 18105743 38 + TSS region transcription start site region 16372
Gm23638 2 18129452 to 18129577 125 - miRNA gene predicted gene, 23638
Tssr16373 2 18129804 to 18129834 30 + TSS region transcription start site region 16373
Tssr16374 2 18155980 to 18155995 15 + TSS region transcription start site region 16374
Tssr16375 2 18156192 to 18156219 27 + TSS region transcription start site region 16375
Gm25147 2 18158687 to 18158791 104 + snRNA gene predicted gene, 25147
Tssr16376 2 18171751 to 18171755 4 + TSS region transcription start site region 16376
Tssr16377 2 18172269 to 18172281 12 + TSS region transcription start site region 16377
Tssr16378 2 18172705 to 18172710 5 + TSS region transcription start site region 16378
Gm13351 2 18179029 to 18179442 413 - pseudogene predicted gene 13351
Tssr22783 2 18179480 to 18179481 1 - TSS region transcription start site region 22783
Tssr16379 2 18186536 to 18186541 5 + TSS region transcription start site region 16379
Tssr16380 2 18186770 to 18186805 35 + TSS region transcription start site region 16380
Gm39761 2 18188864 to 18196587 7723 - lncRNA gene predicted gene, 39761
Tssr16381 2 18192893 to 18192897 4 + TSS region transcription start site region 16381
Dnajc1 2 18206333 to 18392853 186520 - protein coding gene DnaJ heat shock protein family (Hsp40) member C1
Tssr22784 2 18219482 to 18219492 10 - TSS region transcription start site region 22784
Tssr22785 2 18219707 to 18219719 12 - TSS region transcription start site region 22785
Gm13350 2 18249365 to 18249843 478 - pseudogene predicted gene 13350
Tssr22786 2 18292013 to 18292018 5 - TSS region transcription start site region 22786
Tssr22787 2 18307005 to 18307023 18 - TSS region transcription start site region 22787
Tssr16382 2 18307934 to 18307981 47 + TSS region transcription start site region 16382
Tssr22788 2 18308804 to 18308818 14 - TSS region transcription start site region 22788
Tssr22789 2 18316942 to 18316976 34 - TSS region transcription start site region 22789