MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:180449542-180550694

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr22240	2	180454929 to 180454934	5	+	TSS region	transcription start site region 22240
Cpgi12895	2	180455816 to 180457177	1361		CpG island	CpG island 12895
Tssr28112	2	180456094 to 180456105	11	-	TSS region	transcription start site region 28112
Tssr22241	2	180456234 to 180456246	12	+	TSS region	transcription start site region 22241
Slco4a1	2	180456250 to 180474853	18603	+	protein coding gene	solute carrier organic anion transporter family, member 4a1
Tssr22242	2	180456299 to 180456302	3	+	TSS region	transcription start site region 22242
Tssr22243	2	180456307 to 180456341	34	+	TSS region	transcription start site region 22243
Tssr22244	2	180460988 to 180460997	9	+	TSS region	transcription start site region 22244
Tssr22245	2	180461032 to 180461041	9	+	TSS region	transcription start site region 22245
Tssr22246	2	180464041 to 180464065	24	+	TSS region	transcription start site region 22246
Cpgi12896	2	180482469 to 180482635	166		CpG island	CpG island 12896
D2Frk2	2	180487975 to 180488149	174		DNA segment	DNA segment, Chr 2, Frankel 2
Cpgi12897	2	180499542 to 180500694	1152		CpG island	CpG island 12897
Tssr22247	2	180499893 to 180499919	26	+	TSS region	transcription start site region 22247
Ntsr1	2	180499976 to 180544979	45003	+	protein coding gene	neurotensin receptor 1
Tssr805	2	180510283 to 180510284	1	+	TSS region	transcription start site region 805
Tssr28113	2	180541418 to 180541423	5	-	TSS region	transcription start site region 28113
Gm30144	2	180545080 to 180581121	36041	-	lncRNA gene	predicted gene, 30144