Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:180440283-180580284

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr22237 2 180442266 to 180442277 11 + TSS region transcription start site region 22237
Tssr22238 2 180443043 to 180443064 21 + TSS region transcription start site region 22238
Tssr28110 2 180443815 to 180443834 19 - TSS region transcription start site region 28110
Tssr28111 2 180443886 to 180443933 47 - TSS region transcription start site region 28111
Tssr22239 2 180444041 to 180444053 12 + TSS region transcription start site region 22239
Tssr22240 2 180454929 to 180454934 5 + TSS region transcription start site region 22240
Cpgi12895 2 180455816 to 180457177 1361 CpG island CpG island 12895
Tssr28112 2 180456094 to 180456105 11 - TSS region transcription start site region 28112
Tssr22241 2 180456234 to 180456246 12 + TSS region transcription start site region 22241
Slco4a1 2 180456250 to 180474853 18603 + protein coding gene solute carrier organic anion transporter family, member 4a1
Tssr22242 2 180456299 to 180456302 3 + TSS region transcription start site region 22242
Tssr22243 2 180456307 to 180456341 34 + TSS region transcription start site region 22243
Tssr22244 2 180460988 to 180460997 9 + TSS region transcription start site region 22244
Tssr22245 2 180461032 to 180461041 9 + TSS region transcription start site region 22245
Tssr22246 2 180464041 to 180464065 24 + TSS region transcription start site region 22246
Cpgi12896 2 180482469 to 180482635 166 CpG island CpG island 12896
D2Frk2 2 180487975 to 180488149 174 DNA segment DNA segment, Chr 2, Frankel 2
Cpgi12897 2 180499542 to 180500694 1152 CpG island CpG island 12897
Tssr22247 2 180499893 to 180499919 26 + TSS region transcription start site region 22247
Ntsr1 2 180499976 to 180544979 45003 + protein coding gene neurotensin receptor 1
Tssr805 2 180510283 to 180510284 1 + TSS region transcription start site region 805
Tssr28113 2 180541418 to 180541423 5 - TSS region transcription start site region 28113
Gm30144 2 180545080 to 180581121 36041 - lncRNA gene predicted gene, 30144