Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:180034738-180180751

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lsm14b 2 180024987 to 180035465 10478 + protein coding gene LSM family member 14B
Tssr22199 2 180034816 to 180034850 34 + TSS region transcription start site region 22199
Tssr22200 2 180035081 to 180035085 4 + TSS region transcription start site region 22200
Psma7 2 180036374 to 180042433 6059 - protein coding gene proteasome (prosome, macropain) subunit, alpha type 7
Cpgi12882 2 180041647 to 180043528 1881 CpG island CpG island 12882
Tssr22201 2 180041711 to 180041738 27 + TSS region transcription start site region 22201
Tssr28075 2 180042371 to 180042398 27 - TSS region transcription start site region 28075
Tssr28076 2 180042401 to 180042438 37 - TSS region transcription start site region 28076
Tssr22202 2 180042496 to 180042562 66 + TSS region transcription start site region 22202
Ss18l1 2 180042509 to 180070201 27692 + protein coding gene SS18, nBAF chromatin remodeling complex subunit like 1
Tssr22203 2 180042698 to 180042707 9 + TSS region transcription start site region 22203
Tssr22204 2 180042715 to 180042727 12 + TSS region transcription start site region 22204
Tssr22205 2 180042728 to 180042739 11 + TSS region transcription start site region 22205
Tssr22206 2 180042743 to 180042791 48 + TSS region transcription start site region 22206
Cpgi12883 2 180070324 to 180071231 907 CpG island CpG island 12883
Tssr22207 2 180070576 to 180070611 35 + TSS region transcription start site region 22207
Mtg2 2 180070593 to 180085902 15309 + protein coding gene mitochondrial ribosome associated GTPase 2
Hrh3 2 180099465 to 180104407 4942 - protein coding gene histamine receptor H3
Tssr22208 2 180099838 to 180099847 9 + TSS region transcription start site region 22208
Gm17180 2 180099913 to 180101502 1589 + antisense lncRNA gene predicted gene 17180
Cpgi12884 2 180100559 to 180100890 331 CpG island CpG island 12884
Cpgi12885 2 180103069 to 180105244 2175 CpG island CpG island 12885
Tssr801 2 180104400 to 180104426 26 - TSS region transcription start site region 801
Tssr28077 2 180104443 to 180104454 11 - TSS region transcription start site region 28077
Tssr28078 2 180104463 to 180104478 15 - TSS region transcription start site region 28078
Gm46782 2 180104738 to 180110751 6013 - lncRNA gene predicted gene, 46782
Cpgi12886 2 180118828 to 180120172 1344 CpG island CpG island 12886
Tssr22209 2 180119301 to 180119407 106 + TSS region transcription start site region 22209
Osbpl2 2 180119366 to 180162682 43316 + protein coding gene oxysterol binding protein-like 2
Tssr22210 2 180120643 to 180120648 5 + TSS region transcription start site region 22210
Gm29886 2 180149659 to 180171871 22212 - lncRNA gene predicted gene, 29886
Tssr22211 2 180170355 to 180170403 48 + TSS region transcription start site region 22211
Cpgi12887 2 180170856 to 180172498 1642 CpG island CpG island 12887
Adrm1 2 180171490 to 180176284 4794 + protein coding gene adhesion regulating molecule 1
Tssr22212 2 180171562 to 180171573 11 + TSS region transcription start site region 22212
Tssr802 2 180171574 to 180171581 7 + TSS region transcription start site region 802
Tssr22213 2 180171589 to 180171658 69 + TSS region transcription start site region 22213
Tssr22214 2 180171949 to 180171962 13 + TSS region transcription start site region 22214
Lama5 2 180176373 to 180225859 49486 - protein coding gene laminin, alpha 5
Mir7005 2 180179755 to 180179823 68 - miRNA gene microRNA 7005