Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:178836203-180030301

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pwbwq3 2 169952882 to 179278998 9326116 QTL pre-weaning body weight QTL 3
D2Dcr138 2 178837264 to 178837361 97 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 138
Gm35888 2 178850578 to 178850968 390 + lncRNA gene predicted gene, 35888
Tssr22185 2 178850618 to 178850637 19 + TSS region transcription start site region 22185
Tssr22186 2 178964208 to 178964210 2 + TSS region transcription start site region 22186
Gm14314 2 179020119 to 179021133 1014 - pseudogene predicted gene 14314
D2Mit346 2 179031854 to 179031952 98 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 346
Gm35948 2 179039987 to 179048939 8952 + lncRNA gene predicted gene, 35948
D2Mit114 2 179106233 to 179106355 122 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 114
Rbcwd2 2 179144673 to 179144673 0 QTL red blood cell width distribution 2
Gm14292 2 179177425 to 179177880 455 + pseudogene predicted gene 14292
Gm14293 2 179240490 to 179241066 576 + pseudogene predicted gene 14293
Gm14294 2 179364293 to 179365043 750 + pseudogene predicted gene 14294
Tssr22187 2 179414927 to 179414945 18 + TSS region transcription start site region 22187
4930591A17Rik 2 179414936 to 179416880 1944 + lincRNA gene RIKEN cDNA 4930591A17 gene
Tssr22188 2 179414949 to 179414958 9 + TSS region transcription start site region 22188
Gm36004 2 179431203 to 179435301 4098 - lncRNA gene predicted gene, 36004
Cpgi12877 2 179441745 to 179444112 2367 CpG island CpG island 12877
Tssr22189 2 179442407 to 179442421 14 + TSS region transcription start site region 22189
Tssr22190 2 179442427 to 179442442 15 + TSS region transcription start site region 22190
Cdh4 2 179442431 to 179899373 456942 + protein coding gene cadherin 4
Cpgi12878 2 179537448 to 179537692 244 CpG island CpG island 12878
Tssr22191 2 179560863 to 179560894 31 + TSS region transcription start site region 22191
Cpgi12879 2 179565811 to 179566091 280 CpG island CpG island 12879
Gm14300 2 179612622 to 179613567 945 - pseudogene predicted gene 14300
4930449I21Rik 2 179650732 to 179651621 889 unclassified gene RIKEN cDNA 4930449I21 gene
D2Mit1002 2 179653841 to 179653971 130 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 1002
D2Mit1001 2 179653988 to 179654072 84 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 1001
Sluc17 2 179791700 to 179791834 134 QTL susceptibility to lung cancer 17
D2Mit200 2 179791700 to 179791834 134 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 200
Gm36066 2 179794861 to 179805785 10924 - lncRNA gene predicted gene, 36066
Tssr28071 2 179806687 to 179806696 9 - TSS region transcription start site region 28071
Taf4 2 179912152 to 179976646 64494 - protein coding gene TATA-box binding protein associated factor 4
Tssr28072 2 179963873 to 179963884 11 - TSS region transcription start site region 28072
Cpgi12880 2 179974732 to 179977517 2785 CpG island CpG island 12880
Tssr28073 2 179976646 to 179976665 19 - TSS region transcription start site region 28073
Tssr28074 2 179976669 to 179976728 59 - TSS region transcription start site region 28074
Tssr22192 2 179976820 to 179976841 21 + TSS region transcription start site region 22192
4921531C22Rik 2 179976853 to 179979013 2160 + lncRNA gene RIKEN cDNA 4921531C22 gene
Tssr22193 2 179976872 to 179976889 17 + TSS region transcription start site region 22193
Tssr22194 2 179976894 to 179976906 12 + TSS region transcription start site region 22194
Tssr22195 2 179977441 to 179977445 4 + TSS region transcription start site region 22195
Gm14299 2 179993188 to 179993584 396 + pseudogene predicted gene 14299
Cpgi12881 2 180024239 to 180026183 1944 CpG island CpG island 12881
Tssr22196 2 180024903 to 180024914 11 + TSS region transcription start site region 22196
Tssr22197 2 180024951 to 180025007 56 + TSS region transcription start site region 22197
Lsm14b 2 180024987 to 180035465 10478 + protein coding gene LSM family member 14B
Tssr800 2 180025256 to 180025268 12 + TSS region transcription start site region 800