Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:178556854-179506952

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bhr1 2 142751556 to 178800659 36049103 QTL bronchial hyperresponsiveness 1
Nidd2k 2 158236417 to 178800659 20564242 QTL Nidd2 on KK-A
Epfq2 2 162895006 to 178800659 15905653 QTL epididymal fat pad weight QTL 2
Tailq4 2 162895006 to 178800659 15905653 QTL tail length QTL 4
Pwbwq3 2 169952882 to 179278998 9326116 QTL pre-weaning body weight QTL 3
Sls 2 174547204 to 178800659 4253455 heritable phenotypic marker semidominant lethal spotting
Tssr28067 2 178594358 to 178594366 8 - TSS region transcription start site region 28067
Tssr28068 2 178627793 to 178627800 7 - TSS region transcription start site region 28068
Tssr28069 2 178627807 to 178627825 18 - TSS region transcription start site region 28069
Gm40031 2 178634741 to 178640020 5279 + lncRNA gene predicted gene, 40031
Tssr28070 2 178635825 to 178635830 5 - TSS region transcription start site region 28070
Gm35695 2 178659345 to 178665836 6491 + lncRNA gene predicted gene, 35695
Tssr22184 2 178659347 to 178659366 19 + TSS region transcription start site region 22184
Gm35815 2 178680638 to 178687214 6576 + lncRNA gene predicted gene, 35815
D2Mit148 2 178800545 to 178800659 114 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 148
nmf88 2 178800545 to 181111429 2310884 heritable phenotypic marker neuroscience mutagenesis facility, 88
Vacq1 2 178800545 to 181873487 3072942 QTL voluntary alcohol consumption QTL 1
D2Dcr138 2 178837264 to 178837361 97 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 138
Gm35888 2 178850578 to 178850968 390 + lncRNA gene predicted gene, 35888
Tssr22185 2 178850618 to 178850637 19 + TSS region transcription start site region 22185
Tssr22186 2 178964208 to 178964210 2 + TSS region transcription start site region 22186
Gm14314 2 179020119 to 179021133 1014 - pseudogene predicted gene 14314
D2Mit346 2 179031854 to 179031952 98 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 346
Gm35948 2 179039987 to 179048939 8952 + lncRNA gene predicted gene, 35948
D2Mit114 2 179106233 to 179106355 122 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 114
Rbcwd2 2 179144673 to 179144673 0 QTL red blood cell width distribution 2
Gm14292 2 179177425 to 179177880 455 + pseudogene predicted gene 14292
Gm14293 2 179240490 to 179241066 576 + pseudogene predicted gene 14293
Gm14294 2 179364293 to 179365043 750 + pseudogene predicted gene 14294
Tssr22187 2 179414927 to 179414945 18 + TSS region transcription start site region 22187
4930591A17Rik 2 179414936 to 179416880 1944 + lincRNA gene RIKEN cDNA 4930591A17 gene
Tssr22188 2 179414949 to 179414958 9 + TSS region transcription start site region 22188
Gm36004 2 179431203 to 179435301 4098 - lncRNA gene predicted gene, 36004
Cpgi12877 2 179441745 to 179444112 2367 CpG island CpG island 12877
Tssr22189 2 179442407 to 179442421 14 + TSS region transcription start site region 22189
Tssr22190 2 179442427 to 179442442 15 + TSS region transcription start site region 22190
Cdh4 2 179442431 to 179899373 456942 + protein coding gene cadherin 4