Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:178430578-179270968

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bhr1 2 142751556 to 178800659 36049103 QTL bronchial hyperresponsiveness 1
Nidd2k 2 158236417 to 178800659 20564242 QTL Nidd2 on KK-A
Tailq4 2 162895006 to 178800659 15905653 QTL tail length QTL 4
Epfq2 2 162895006 to 178800659 15905653 QTL epididymal fat pad weight QTL 2
Sls 2 174547204 to 178800659 4253455 heritable phenotypic marker semidominant lethal spotting
Cdh26 2 178430531 to 178487366 56835 + protein coding gene cadherin-like 26
Tssr22179 2 178455400 to 178455417 17 + TSS region transcription start site region 22179
Tssr22180 2 178455431 to 178455446 15 + TSS region transcription start site region 22180
Tssr22181 2 178455466 to 178455473 7 + TSS region transcription start site region 22181
Tssr798 2 178455537 to 178455543 6 + TSS region transcription start site region 798
D2Mit504 2 178489659 to 178489856 197 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 504
Tssr22182 2 178494342 to 178494382 40 + TSS region transcription start site region 22182
Gm35582 2 178497211 to 178502082 4871 - lncRNA gene predicted gene, 35582
Tssr22183 2 178502141 to 178502161 20 + TSS region transcription start site region 22183
Tssr28064 2 178506060 to 178506069 9 - TSS region transcription start site region 28064
Tssr28065 2 178506111 to 178506127 16 - TSS region transcription start site region 28065
Tssr799 2 178506161 to 178506168 7 - TSS region transcription start site region 799
Cpgi12876 2 178506199 to 178506430 231 CpG island CpG island 12876
D2Mit506 2 178510286 to 178510431 145 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 506
Tssr28066 2 178546410 to 178546451 41 - TSS region transcription start site region 28066
Tssr28067 2 178594358 to 178594366 8 - TSS region transcription start site region 28067
Tssr28068 2 178627793 to 178627800 7 - TSS region transcription start site region 28068
Tssr28069 2 178627807 to 178627825 18 - TSS region transcription start site region 28069
Gm40031 2 178634741 to 178640020 5279 + lncRNA gene predicted gene, 40031
Tssr28070 2 178635825 to 178635830 5 - TSS region transcription start site region 28070
Gm35695 2 178659345 to 178665836 6491 + lncRNA gene predicted gene, 35695
Tssr22184 2 178659347 to 178659366 19 + TSS region transcription start site region 22184
Gm35815 2 178680638 to 178687214 6576 + lncRNA gene predicted gene, 35815
D2Mit148 2 178800545 to 178800659 114 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 148
Vacq1 2 178800545 to 181873487 3072942 QTL voluntary alcohol consumption QTL 1
nmf88 2 178800545 to 181111429 2310884 heritable phenotypic marker neuroscience mutagenesis facility, 88
D2Dcr138 2 178837264 to 178837361 97 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 138
Gm35888 2 178850578 to 178850968 390 + lncRNA gene predicted gene, 35888
Tssr22185 2 178850618 to 178850637 19 + TSS region transcription start site region 22185
Tssr22186 2 178964208 to 178964210 2 + TSS region transcription start site region 22186
Gm14314 2 179020119 to 179021133 1014 - pseudogene predicted gene 14314
D2Mit346 2 179031854 to 179031952 98 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 346
Gm35948 2 179039987 to 179048939 8952 + lncRNA gene predicted gene, 35948
D2Mit114 2 179106233 to 179106355 122 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 114
Rbcwd2 2 179144673 to 179144673 0 QTL red blood cell width distribution 2
Gm14292 2 179177425 to 179177880 455 + pseudogene predicted gene 14292
Gm14293 2 179240490 to 179241066 576 + pseudogene predicted gene 14293