Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:178401617-178431622

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sycp2 2 178345293 to 178407685 62392 - protein coding gene synaptonemal complex protein 2
4930421P05Rik 2 178404157 to 178409291 5134 unclassified gene RIKEN cDNA 4930421P05 gene
Cpgi12874 2 178407132 to 178407797 665 CpG island CpG island 12874
Tssr28057 2 178407449 to 178407470 21 - TSS region transcription start site region 28057
Tssr28058 2 178407481 to 178407498 17 - TSS region transcription start site region 28058
Tssr28059 2 178407583 to 178407598 15 - TSS region transcription start site region 28059
Ppp1r3d 2 178411206 to 178414463 3257 - protein coding gene protein phosphatase 1, regulatory subunit 3D
Cpgi12875 2 178413225 to 178415213 1988 CpG island CpG island 12875
Tssr28060 2 178414405 to 178414446 41 - TSS region transcription start site region 28060
Tssr28061 2 178414460 to 178414507 47 - TSS region transcription start site region 28061
Tssr22178 2 178414512 to 178414591 79 + TSS region transcription start site region 22178
Fam217b 2 178414534 to 178422181 7647 + protein coding gene family with sequence similarity 217, member B
Tssr796 2 178414904 to 178414945 41 - TSS region transcription start site region 796
Tssr28062 2 178416604 to 178416607 3 - TSS region transcription start site region 28062
Tssr797 2 178416617 to 178416622 5 - TSS region transcription start site region 797
Tssr28063 2 178416629 to 178416639 10 - TSS region transcription start site region 28063
1700093E11Rik 2 178417477 to 178418241 764 unclassified gene RIKEN cDNA 1700093E11 gene
Gm35532 2 178427715 to 178429642 1927 - lncRNA gene predicted gene, 35532
Cdh26 2 178430531 to 178487366 56835 + protein coding gene cadherin-like 26