Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:178242542-178412567

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Phactr3 2 178118975 to 178338492 219517 + protein coding gene phosphatase and actin regulator 3
Tssr22173 2 178295338 to 178295343 5 + TSS region transcription start site region 22173
Cpgi12873 2 178327425 to 178327608 183 CpG island CpG island 12873
Tssr22174 2 178327511 to 178327534 23 + TSS region transcription start site region 22174
Tssr22175 2 178327542 to 178327567 25 + TSS region transcription start site region 22175
Tssr22176 2 178327602 to 178327613 11 + TSS region transcription start site region 22176
Tssr22177 2 178327663 to 178327683 20 + TSS region transcription start site region 22177
Sycp2 2 178345293 to 178407685 62392 - protein coding gene synaptonemal complex protein 2
Gm18662 2 178361039 to 178362115 1076 - pseudogene predicted gene, 18662
Tssr28055 2 178364873 to 178364898 25 - TSS region transcription start site region 28055
Tssr28056 2 178369372 to 178369382 10 - TSS region transcription start site region 28056
D2Mit73 2 178401000 to 178401247 247 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 73
4930421P05Rik 2 178404157 to 178409291 5134 unclassified gene RIKEN cDNA 4930421P05 gene
Cpgi12874 2 178407132 to 178407797 665 CpG island CpG island 12874
Tssr28057 2 178407449 to 178407470 21 - TSS region transcription start site region 28057
Tssr28058 2 178407481 to 178407498 17 - TSS region transcription start site region 28058
Tssr28059 2 178407583 to 178407598 15 - TSS region transcription start site region 28059
Ppp1r3d 2 178411206 to 178414463 3257 - protein coding gene protein phosphatase 1, regulatory subunit 3D