Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:178038975-178418492

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46791 2 178050379 to 178059031 8652 - lncRNA gene predicted gene, 46791
Zfp931 2 178067695 to 178078476 10781 - protein coding gene zinc finger protein 931
Gm35319 2 178078560 to 178114013 35453 + lncRNA gene predicted gene, 35319
Cpgi12870 2 178118907 to 178119604 697 CpG island CpG island 12870
Phactr3 2 178118975 to 178338492 219517 + protein coding gene phosphatase and actin regulator 3
Tssr22166 2 178119112 to 178119158 46 + TSS region transcription start site region 22166
Tssr22167 2 178119166 to 178119183 17 + TSS region transcription start site region 22167
Tssr22168 2 178141876 to 178141887 11 + TSS region transcription start site region 22168
Tssr22169 2 178141893 to 178141916 23 + TSS region transcription start site region 22169
Tssr22170 2 178141920 to 178141939 19 + TSS region transcription start site region 22170
Tssr795 2 178142204 to 178142217 13 + TSS region transcription start site region 795
Cpgi12871 2 178142292 to 178142719 427 CpG island CpG island 12871
Cpgi12872 2 178175370 to 178175587 217 CpG island CpG island 12872
Tssr22171 2 178193075 to 178193099 24 + TSS region transcription start site region 22171
Tssr22172 2 178193102 to 178193118 16 + TSS region transcription start site region 22172
Tssr22173 2 178295338 to 178295343 5 + TSS region transcription start site region 22173
Cpgi12873 2 178327425 to 178327608 183 CpG island CpG island 12873
Tssr22174 2 178327511 to 178327534 23 + TSS region transcription start site region 22174
Tssr22175 2 178327542 to 178327567 25 + TSS region transcription start site region 22175
Tssr22176 2 178327602 to 178327613 11 + TSS region transcription start site region 22176
Tssr22177 2 178327663 to 178327683 20 + TSS region transcription start site region 22177
Sycp2 2 178345293 to 178407685 62392 - protein coding gene synaptonemal complex protein 2
Gm18662 2 178361039 to 178362115 1076 - pseudogene predicted gene, 18662
Tssr28055 2 178364873 to 178364898 25 - TSS region transcription start site region 28055
Tssr28056 2 178369372 to 178369382 10 - TSS region transcription start site region 28056
D2Mit73 2 178401000 to 178401247 247 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 73
4930421P05Rik 2 178404157 to 178409291 5134 unclassified gene RIKEN cDNA 4930421P05 gene
Cpgi12874 2 178407132 to 178407797 665 CpG island CpG island 12874
Tssr28057 2 178407449 to 178407470 21 - TSS region transcription start site region 28057
Tssr28058 2 178407481 to 178407498 17 - TSS region transcription start site region 28058
Tssr28059 2 178407583 to 178407598 15 - TSS region transcription start site region 28059
Ppp1r3d 2 178411206 to 178414463 3257 - protein coding gene protein phosphatase 1, regulatory subunit 3D
Cpgi12875 2 178413225 to 178415213 1988 CpG island CpG island 12875
Tssr28060 2 178414405 to 178414446 41 - TSS region transcription start site region 28060
Tssr28061 2 178414460 to 178414507 47 - TSS region transcription start site region 28061
Tssr22178 2 178414512 to 178414591 79 + TSS region transcription start site region 22178
Fam217b 2 178414534 to 178422181 7647 + protein coding gene family with sequence similarity 217, member B
Tssr796 2 178414904 to 178414945 41 - TSS region transcription start site region 796
Tssr28062 2 178416604 to 178416607 3 - TSS region transcription start site region 28062
Tssr797 2 178416617 to 178416622 5 - TSS region transcription start site region 797
Tssr28063 2 178416629 to 178416639 10 - TSS region transcription start site region 28063
1700093E11Rik 2 178417477 to 178418241 764 unclassified gene RIKEN cDNA 1700093E11 gene