Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:177552285-178362312

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm14406 2 177569204 to 177578210 9006 - protein coding gene predicted gene 14406
Gm14324 2 177734300 to 177738757 4457 + pseudogene predicted gene 14324
Tssr22164 2 177759254 to 177759293 39 + TSS region transcription start site region 22164
Gm14322 2 177759288 to 177770472 11184 + protein coding gene predicted gene 14322
Tssr794 2 177764030 to 177764032 2 + TSS region transcription start site region 794
Gm14325 2 177831791 to 177840336 8545 - protein coding gene predicted gene 14325
Tssr28052 2 177840344 to 177840354 10 - TSS region transcription start site region 28052
Gm14429 2 177852152 to 177855503 3351 - pseudogene predicted gene 14429
Gm14323 2 177892638 to 177893264 626 + pseudogene predicted gene 14323
Gm14327 2 177897096 to 177905784 8688 + protein coding gene predicted gene 14327
Zfp972 2 177903340 to 177925613 22273 - protein coding gene zinc finger protein 972
Gm14326 2 177935993 to 177957297 21304 - protein coding gene predicted gene 14326
Tssr28053 2 177939017 to 177939020 3 - TSS region transcription start site region 28053
Tssr28054 2 177957285 to 177957312 27 - TSS region transcription start site region 28054
Gm14428 2 177980534 to 177982700 2166 - pseudogene predicted gene 14428
Gm40030 2 178002755 to 178018928 16173 + lncRNA gene predicted gene, 40030
Tssr22165 2 178023274 to 178023291 17 + TSS region transcription start site region 22165
Zfp971 2 178023284 to 178034022 10738 + protein coding gene zinc finger protein 971
Gm26869 2 178023808 to 178028736 4928 - lincRNA gene predicted gene, 26869
Gm46791 2 178050379 to 178059031 8652 - lncRNA gene predicted gene, 46791
Zfp931 2 178067695 to 178078476 10781 - protein coding gene zinc finger protein 931
Gm35319 2 178078560 to 178114013 35453 + lncRNA gene predicted gene, 35319
Cpgi12870 2 178118907 to 178119604 697 CpG island CpG island 12870
Phactr3 2 178118975 to 178338492 219517 + protein coding gene phosphatase and actin regulator 3
Tssr22166 2 178119112 to 178119158 46 + TSS region transcription start site region 22166
Tssr22167 2 178119166 to 178119183 17 + TSS region transcription start site region 22167
Tssr22168 2 178141876 to 178141887 11 + TSS region transcription start site region 22168
Tssr22169 2 178141893 to 178141916 23 + TSS region transcription start site region 22169
Tssr22170 2 178141920 to 178141939 19 + TSS region transcription start site region 22170
Tssr795 2 178142204 to 178142217 13 + TSS region transcription start site region 795
Cpgi12871 2 178142292 to 178142719 427 CpG island CpG island 12871
Cpgi12872 2 178175370 to 178175587 217 CpG island CpG island 12872
Tssr22171 2 178193075 to 178193099 24 + TSS region transcription start site region 22171
Tssr22172 2 178193102 to 178193118 16 + TSS region transcription start site region 22172
Tssr22173 2 178295338 to 178295343 5 + TSS region transcription start site region 22173
Cpgi12873 2 178327425 to 178327608 183 CpG island CpG island 12873
Tssr22174 2 178327511 to 178327534 23 + TSS region transcription start site region 22174
Tssr22175 2 178327542 to 178327567 25 + TSS region transcription start site region 22175
Tssr22176 2 178327602 to 178327613 11 + TSS region transcription start site region 22176
Tssr22177 2 178327663 to 178327683 20 + TSS region transcription start site region 22177
Sycp2 2 178345293 to 178407685 62392 - protein coding gene synaptonemal complex protein 2
Gm18662 2 178361039 to 178362115 1076 - pseudogene predicted gene, 18662