Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:17749740-18049894

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm13323 2 17797328 to 17797674 346 - pseudogene predicted gene 13323
Cpgi11226 2 17839247 to 17839477 230 CpG island CpG island 11226
Cpgi11227 2 17899740 to 17899894 154 CpG island CpG island 11227
Cpgi11228 2 17932807 to 17932995 188 CpG island CpG island 11228
H2al2a 2 17996417 to 17996958 541 - protein coding gene H2A histone family member L2A
Tssr22769 2 17996917 to 17996919 2 - TSS region transcription start site region 22769
Tssr22770 2 17996924 to 17996945 21 - TSS region transcription start site region 22770
Gm13329 2 17998241 to 17998505 264 - pseudogene predicted gene 13329
Gm33085 2 18019767 to 18035222 15455 - lncRNA gene predicted gene, 33085
A930004D18Rik 2 18025193 to 18037737 12544 - protein coding gene RIKEN cDNA A930004D18 gene
Cpgi11229 2 18025993 to 18029110 3117 CpG island CpG island 11229
Gm17762 2 18027249 to 18030577 3328 + lncRNA gene predicted gene, 17762
Tssr22771 2 18027448 to 18027493 45 - TSS region transcription start site region 22771
Tssr16354 2 18027734 to 18027748 14 + TSS region transcription start site region 16354
Tssr16355 2 18027948 to 18027983 35 + TSS region transcription start site region 16355
Tssr22772 2 18028644 to 18028655 11 - TSS region transcription start site region 22772
Tssr22773 2 18028741 to 18028770 29 - TSS region transcription start site region 22773
Tssr22774 2 18028820 to 18028840 20 - TSS region transcription start site region 22774
Tssr22775 2 18030967 to 18030972 5 - TSS region transcription start site region 22775
Cpgi11230 2 18031523 to 18032142 619 CpG island CpG island 11230
Gm13330 2 18032533 to 18039633 7100 + antisense lncRNA gene predicted gene 13330
Cpgi11231 2 18039643 to 18040000 357 CpG island CpG island 11231
Skida1 2 18040676 to 18049051 8375 - protein coding gene SKI/DACH domain containing 1
Cpgi11232 2 18040941 to 18041092 151 CpG island CpG island 11232
Cpgi11233 2 18046703 to 18048398 1695 CpG island CpG island 11233
Tssr22776 2 18047785 to 18047801 16 - TSS region transcription start site region 22776
Tssr22777 2 18047815 to 18047846 31 - TSS region transcription start site region 22777
Tssr22778 2 18047873 to 18047895 22 - TSS region transcription start site region 22778
Tssr22779 2 18048347 to 18048351 4 - TSS region transcription start site region 22779
Tssr22780 2 18048787 to 18048822 35 - TSS region transcription start site region 22780
Tssr16356 2 18049003 to 18049027 24 + TSS region transcription start site region 16356