Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:176163453-178206506

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42249 2 176181123 to 176203875 22752 + pseudogene predicted gene, 42249
Gm6182 2 176201042 to 176203572 2530 + pseudogene predicted gene 6182
2210418O10Rik 2 176226569 to 176240328 13759 + protein coding gene RIKEN cDNA 2210418O10 gene
Gm17258 2 176257249 to 176258516 1267 + pseudogene predicted gene, 17258
Gm1980 2 176298827 to 176302568 3741 + pseudogene predicted gene 1980
Gm11009 2 176317638 to 176319494 1856 - protein coding gene predicted gene 11009
Gm14435 2 176423594 to 176435761 12167 + protein coding gene predicted gene 14435
Gm16362 2 176452627 to 176452840 213 - pseudogene predicted gene 16362
Gm41982 2 176463235 to 176466359 3124 - lncRNA gene predicted gene, 41982
Gm14434 2 176473278 to 176486783 13505 - protein coding gene predicted gene 14434
Zfp967 2 176521056 to 176532479 11423 + protein coding gene zinc finger protein 967
Gm14307 2 176602206 to 176602496 290 - pseudogene predicted gene 14307
Gm41983 2 176612799 to 176615923 3124 - lncRNA gene predicted gene, 41983
Gm14308 2 176619933 to 176636319 16386 - protein coding gene predicted gene 14308
Zfp973 2 176670522 to 176681090 10568 + protein coding gene zinc finger protein 973
Gm14305 2 176708353 to 176721813 13460 + protein coding gene predicted gene 14305
Gm14301 2 176742172 to 176742495 323 + pseudogene predicted gene 14301
Gm14390 2 176754436 to 176755730 1294 - pseudogene predicted gene 14390
Gm14295 2 176798612 to 176811223 12611 + protein coding gene predicted gene 14295
Gm14408 2 176831140 to 176836730 5590 + protein coding gene predicted gene 14408
Gm14405 2 176851851 to 176855548 3697 - pseudogene predicted gene 14405
Gm41984 2 176876911 to 176892225 15314 + lncRNA gene predicted gene, 41984
Gm14296 2 176892509 to 176927809 35300 - protein coding gene predicted gene 14296
Gm17961 2 176949879 to 176950715 836 - pseudogene predicted gene, 17961
Gm14417 2 176950908 to 176953323 2415 - pseudogene predicted gene 14417
Gm14419 2 177000956 to 177012787 11831 + protein coding gene predicted gene 14419
Gm36055 2 177019667 to 177022287 2620 + lncRNA gene predicted gene, 36055
Gm14402 2 177032655 to 177038354 5699 + pseudogene predicted gene 14402
Gm14421 2 177054064 to 177056510 2446 - pseudogene predicted gene 14421
Tssr22162 2 177074263 to 177074291 28 + TSS region transcription start site region 22162
Gm14407 2 177085356 to 177085802 446 - pseudogene predicted gene 14407
Gm14401 2 177086318 to 177087605 1287 + protein coding gene predicted gene 14401
Gm14415 2 177103564 to 177106488 2924 - pseudogene predicted gene 14415
Gm14411 2 177125463 to 177127709 2246 - pseudogene predicted gene 14411
Gm14416 2 177138660 to 177142331 3671 + pseudogene predicted gene 14416
Gm14413 2 177167290 to 177172870 5580 - pseudogene predicted gene 14413
Gm46790 2 177183453 to 177186506 3053 - lncRNA gene predicted gene, 46790
Gm14410 2 177201444 to 177206502 5058 - protein coding gene predicted gene 14410
Gm14400 2 177225473 to 177228963 3490 - pseudogene predicted gene 14400
Gm14409 2 177264654 to 177267036 2382 - protein coding gene predicted gene 14409
Gm41987 2 177301042 to 177307559 6517 - lncRNA gene predicted gene, 41987
Gm14412 2 177314520 to 177324307 9787 - protein coding gene predicted gene 14412
Gm41986 2 177322532 to 177341617 19085 + lncRNA gene predicted gene, 41986
Tssr28050 2 177329843 to 177329863 20 - TSS region transcription start site region 28050
Gm14418 2 177387124 to 177398320 11196 - protein coding gene predicted gene 14418
Tssr28051 2 177398310 to 177398340 30 - TSS region transcription start site region 28051
Gm14404 2 177419902 to 177422936 3034 - pseudogene predicted gene 14404
Tssr22163 2 177460194 to 177460196 2 + TSS region transcription start site region 22163
Gm14414 2 177460275 to 177460847 572 + pseudogene predicted gene 14414
Zfp970 2 177464733 to 177478129 13396 + protein coding gene zinc finger protein 970
Gm14403 2 177498215 to 177509763 11548 + protein coding gene predicted gene 14403
Gm16363 2 177541681 to 177542557 876 - pseudogene predicted gene 16363
Gm14406 2 177569204 to 177578210 9006 - protein coding gene predicted gene 14406
Gm14324 2 177734300 to 177738757 4457 + pseudogene predicted gene 14324
Tssr22164 2 177759254 to 177759293 39 + TSS region transcription start site region 22164
Gm14322 2 177759288 to 177770472 11184 + protein coding gene predicted gene 14322
Tssr794 2 177764030 to 177764032 2 + TSS region transcription start site region 794
Gm14325 2 177831791 to 177840336 8545 - protein coding gene predicted gene 14325
Tssr28052 2 177840344 to 177840354 10 - TSS region transcription start site region 28052
Gm14429 2 177852152 to 177855503 3351 - pseudogene predicted gene 14429
Gm14323 2 177892638 to 177893264 626 + pseudogene predicted gene 14323
Gm14327 2 177897096 to 177905784 8688 + protein coding gene predicted gene 14327
Zfp972 2 177903340 to 177925613 22273 - protein coding gene zinc finger protein 972
Gm14326 2 177935993 to 177957297 21304 - protein coding gene predicted gene 14326
Tssr28053 2 177939017 to 177939020 3 - TSS region transcription start site region 28053
Tssr28054 2 177957285 to 177957312 27 - TSS region transcription start site region 28054
Gm14428 2 177980534 to 177982700 2166 - pseudogene predicted gene 14428
Gm40030 2 178002755 to 178018928 16173 + lncRNA gene predicted gene, 40030
Tssr22165 2 178023274 to 178023291 17 + TSS region transcription start site region 22165
Zfp971 2 178023284 to 178034022 10738 + protein coding gene zinc finger protein 971
Gm26869 2 178023808 to 178028736 4928 - lincRNA gene predicted gene, 26869
Gm46791 2 178050379 to 178059031 8652 - lncRNA gene predicted gene, 46791
Zfp931 2 178067695 to 178078476 10781 - protein coding gene zinc finger protein 931
Gm35319 2 178078560 to 178114013 35453 + lncRNA gene predicted gene, 35319
Cpgi12870 2 178118907 to 178119604 697 CpG island CpG island 12870
Phactr3 2 178118975 to 178338492 219517 + protein coding gene phosphatase and actin regulator 3
Tssr22166 2 178119112 to 178119158 46 + TSS region transcription start site region 22166
Tssr22167 2 178119166 to 178119183 17 + TSS region transcription start site region 22167
Tssr22168 2 178141876 to 178141887 11 + TSS region transcription start site region 22168
Tssr22169 2 178141893 to 178141916 23 + TSS region transcription start site region 22169
Tssr22170 2 178141920 to 178141939 19 + TSS region transcription start site region 22170
Tssr795 2 178142204 to 178142217 13 + TSS region transcription start site region 795
Cpgi12871 2 178142292 to 178142719 427 CpG island CpG island 12871
Cpgi12872 2 178175370 to 178175587 217 CpG island CpG island 12872
Tssr22171 2 178193075 to 178193099 24 + TSS region transcription start site region 22171
Tssr22172 2 178193102 to 178193118 16 + TSS region transcription start site region 22172