Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:174519454-175695015

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scgq3 2 151867353 to 174547331 22679978 QTL spontaneous crescentic glomerulonephritis QTL 3
D2Mit213 2 174547204 to 174547331 127 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 213
Sls 2 174547204 to 178800659 4253455 heritable phenotypic marker semidominant lethal spotting
Gm40015 2 174581925 to 174593773 11848 - lncRNA gene predicted gene, 40015
Vmn1r-ps1 2 174591230 to 174591802 572 + pseudogene vomeronasal 1 receptor, pseudogene 1
Tssr22155 2 174598653 to 174598674 21 + TSS region transcription start site region 22155
Tssr22156 2 174598695 to 174598726 31 + TSS region transcription start site region 22156
Gm46781 2 174602812 to 174611340 8528 - lncRNA gene predicted gene, 46781
Tssr28037 2 174614027 to 174614034 7 - TSS region transcription start site region 28037
Tssr28038 2 174614043 to 174614060 17 - TSS region transcription start site region 28038
Tssr28039 2 174614087 to 174614113 26 - TSS region transcription start site region 28039
Tssr22157 2 174614158 to 174614218 60 + TSS region transcription start site region 22157
Tssr28040 2 174614345 to 174614370 25 - TSS region transcription start site region 28040
Tssr28041 2 174614372 to 174614384 12 - TSS region transcription start site region 28041
Zfp831 2 174643534 to 174710832 67298 + protein coding gene zinc finger protein 831
D2Mit210 2 174650043 to 174650191 148 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 210
Cpgi12867 2 174674113 to 174674289 176 CpG island CpG island 12867
Tssr22158 2 174760366 to 174760379 13 + TSS region transcription start site region 22158
Cpgi12868 2 174760476 to 174761148 672 CpG island CpG island 12868
Edn3 2 174760619 to 174784042 23423 + protein coding gene endothelin 3
Tssr22159 2 174760752 to 174760780 28 + TSS region transcription start site region 22159
Tssr22160 2 174760781 to 174760796 15 + TSS region transcription start site region 22160
Tssr793 2 174774820 to 174774829 9 + TSS region transcription start site region 793
Tssr28042 2 174807859 to 174807868 9 - TSS region transcription start site region 28042
Gm14617 2 174835964 to 174841174 5210 - unclassified non-coding RNA gene predicted gene 14617
Gm14618 2 174842305 to 174853357 11052 - lincRNA gene predicted gene 14618
Tssr28043 2 174849987 to 174849993 6 - TSS region transcription start site region 28043
5730415C11Rik 2 174850639 to 174852467 1828 unclassified gene RIKEN cDNA 5730415C11 gene
Cpgi12869 2 174852027 to 174852308 281 CpG island CpG island 12869
Tssr28044 2 174853218 to 174853223 5 - TSS region transcription start site region 28044
Tssr28045 2 174853244 to 174853251 7 - TSS region transcription start site region 28045
Tssr28046 2 174853281 to 174853301 20 - TSS region transcription start site region 28046
Tssr28047 2 174853303 to 174853310 7 - TSS region transcription start site region 28047
Tssr28048 2 174853355 to 174853359 4 - TSS region transcription start site region 28048
Gm14616 2 174856289 to 174866531 10242 + lincRNA gene predicted gene 14616
Gm30537 2 174880354 to 174897109 16755 + lncRNA gene predicted gene, 30537
Gm40017 2 174918374 to 174974406 56032 + lncRNA gene predicted gene, 40017
Tssr28049 2 174927743 to 174927749 6 - TSS region transcription start site region 28049
D2Jpk5 2 174927967 to 174928179 212 DNA segment DNA segment, Chr 2, Japan, Kominami 5
Gm30591 2 174935150 to 174941949 6799 - lncRNA gene predicted gene, 30591
D2Mit517 2 174958522 to 174958615 93 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology-517
Gm14444 2 175010241 to 175019248 9007 + protein coding gene predicted gene 14444
Gm16354 2 175023354 to 175023503 149 - pseudogene predicted gene 16354
Gm14445 2 175038121 to 175041036 2915 + pseudogene predicted gene 14445
Gm14393 2 175061549 to 175067769 6220 - protein coding gene predicted gene 14393
Gm14439 2 175062436 to 175062876 440 + pseudogene predicted gene 14439
Gm14387 2 175086501 to 175089918 3417 + pseudogene predicted gene 14387
Gm14392 2 175104454 to 175110015 5561 - pseudogene predicted gene 14392
Gm14399 2 175129493 to 175142012 12519 - protein coding gene predicted gene 14399
Gm16355 2 175153998 to 175154228 230 + pseudogene predicted gene 16355
Gm14443 2 175166255 to 175175871 9616 - protein coding gene predicted gene 14443
Gm14391 2 175191065 to 175206917 15852 - protein coding gene predicted gene 14391
Gm14442 2 175228176 to 175231291 3115 - pseudogene predicted gene 14442
Gm14438 2 175270556 to 175271179 623 + pseudogene predicted gene 14438
Gm14440 2 175275125 to 175286805 11680 + protein coding gene predicted gene 14440
Gm14298 2 175304097 to 175304333 236 - pseudogene predicted gene 14298
Gm46795 2 175314700 to 175317824 3124 - lncRNA gene predicted gene, 46795
Gm4631 2 175322344 to 175338300 15956 - protein coding gene predicted gene 4631
Zfp968 2 175372436 to 175384201 11765 + protein coding gene zinc finger protein 968
Gm14297 2 175401664 to 175401954 290 - pseudogene predicted gene 14297
Gm46792 2 175412257 to 175415381 3124 - lncRNA gene predicted gene, 46792
Gm4724 2 175422300 to 175435807 13507 - protein coding gene predicted gene 4724
Zfp965 2 175470025 to 175480553 10528 + protein coding gene zinc finger protein 965
Gm11007 2 175643978 to 175653860 9882 + protein coding gene predicted gene 11007
Gm46794 2 175660779 to 175663903 3124 + lncRNA gene predicted gene, 46794
Gm16359 2 175674203 to 175674491 288 + pseudogene predicted gene 16359
Zfp969 2 175692223 to 175703646 11423 - protein coding gene zinc finger protein 969