Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:174488534-174865832

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scgq3 2 151867353 to 174547331 22679978 QTL spontaneous crescentic glomerulonephritis QTL 3
Cpgi12866 2 174502934 to 174503139 205 CpG island CpG island 12866
D2Mit213 2 174547204 to 174547331 127 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 213
Sls 2 174547204 to 178800659 4253455 heritable phenotypic marker semidominant lethal spotting
Gm40015 2 174581925 to 174593773 11848 - lncRNA gene predicted gene, 40015
Vmn1r-ps1 2 174591230 to 174591802 572 + pseudogene vomeronasal 1 receptor, pseudogene 1
Tssr22155 2 174598653 to 174598674 21 + TSS region transcription start site region 22155
Tssr22156 2 174598695 to 174598726 31 + TSS region transcription start site region 22156
Gm46781 2 174602812 to 174611340 8528 - lncRNA gene predicted gene, 46781
Tssr28037 2 174614027 to 174614034 7 - TSS region transcription start site region 28037
Tssr28038 2 174614043 to 174614060 17 - TSS region transcription start site region 28038
Tssr28039 2 174614087 to 174614113 26 - TSS region transcription start site region 28039
Tssr22157 2 174614158 to 174614218 60 + TSS region transcription start site region 22157
Tssr28040 2 174614345 to 174614370 25 - TSS region transcription start site region 28040
Tssr28041 2 174614372 to 174614384 12 - TSS region transcription start site region 28041
Zfp831 2 174643534 to 174710832 67298 + protein coding gene zinc finger protein 831
D2Mit210 2 174650043 to 174650191 148 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 210
Cpgi12867 2 174674113 to 174674289 176 CpG island CpG island 12867
Tssr22158 2 174760366 to 174760379 13 + TSS region transcription start site region 22158
Cpgi12868 2 174760476 to 174761148 672 CpG island CpG island 12868
Edn3 2 174760619 to 174784042 23423 + protein coding gene endothelin 3
Tssr22159 2 174760752 to 174760780 28 + TSS region transcription start site region 22159
Tssr22160 2 174760781 to 174760796 15 + TSS region transcription start site region 22160
Tssr793 2 174774820 to 174774829 9 + TSS region transcription start site region 793
Tssr28042 2 174807859 to 174807868 9 - TSS region transcription start site region 28042
Gm14617 2 174835964 to 174841174 5210 - unclassified non-coding RNA gene predicted gene 14617
Gm14618 2 174842305 to 174853357 11052 - lincRNA gene predicted gene 14618
Tssr28043 2 174849987 to 174849993 6 - TSS region transcription start site region 28043
5730415C11Rik 2 174850639 to 174852467 1828 unclassified gene RIKEN cDNA 5730415C11 gene
Cpgi12869 2 174852027 to 174852308 281 CpG island CpG island 12869
Tssr28044 2 174853218 to 174853223 5 - TSS region transcription start site region 28044
Tssr28045 2 174853244 to 174853251 7 - TSS region transcription start site region 28045
Tssr28046 2 174853281 to 174853301 20 - TSS region transcription start site region 28046
Tssr28047 2 174853303 to 174853310 7 - TSS region transcription start site region 28047
Tssr28048 2 174853355 to 174853359 4 - TSS region transcription start site region 28048
Gm14616 2 174856289 to 174866531 10242 + lincRNA gene predicted gene 14616