Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:174430695-174477882

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ctsz 2 174427494 to 174439039 11545 - protein coding gene cathepsin Z
Tssr28023 2 174432429 to 174432441 12 - TSS region transcription start site region 28023
Tssr28024 2 174433548 to 174433572 24 - TSS region transcription start site region 28024
Tssr28025 2 174433627 to 174433652 25 - TSS region transcription start site region 28025
Tssr28026 2 174437774 to 174437776 2 - TSS region transcription start site region 28026
Tssr22150 2 174438201 to 174438262 61 + TSS region transcription start site region 22150
Tssr28027 2 174438307 to 174438339 32 - TSS region transcription start site region 28027
Cpgi12862 2 174438663 to 174439303 640 CpG island CpG island 12862
Tssr28028 2 174438897 to 174438938 41 - TSS region transcription start site region 28028
Tssr28029 2 174438940 to 174438959 19 - TSS region transcription start site region 28029
Tssr28030 2 174438961 to 174438995 34 - TSS region transcription start site region 28030
Tssr28031 2 174438996 to 174439029 33 - TSS region transcription start site region 28031
Tssr22151 2 174439074 to 174439126 52 + TSS region transcription start site region 22151
Tssr22152 2 174439706 to 174439727 21 + TSS region transcription start site region 22152
Rpl30-ps5 2 174440929 to 174441289 360 - pseudogene ribosomal protein L30, pseudogene 5
Tssr28032 2 174441350 to 174441360 10 - TSS region transcription start site region 28032
Tssr22153 2 174442231 to 174442238 7 + TSS region transcription start site region 22153
Tssr22154 2 174450678 to 174450708 30 + TSS region transcription start site region 22154
Tubb1 2 174450695 to 174457882 7187 + protein coding gene tubulin, beta 1 class VI
Cpgi12863 2 174456876 to 174457544 668 CpG island CpG island 12863
Atp5e 2 174461075 to 174464101 3026 - protein coding gene ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
Cpgi12864 2 174463656 to 174464380 724 CpG island CpG island 12864
Tssr28033 2 174464039 to 174464050 11 - TSS region transcription start site region 28033
Tssr28034 2 174464063 to 174464099 36 - TSS region transcription start site region 28034
Prelid3b 2 174465076 to 174472991 7915 - protein coding gene PRELI domain containing 3B
Cpgi12865 2 174472318 to 174473472 1154 CpG island CpG island 12865
Tssr28035 2 174472878 to 174472936 58 - TSS region transcription start site region 28035
Tssr28036 2 174472949 to 174473019 70 - TSS region transcription start site region 28036
Gm38546 2 174473176 to 174474109 933 + lncRNA gene predicted gene, 38546