Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:174405964-175271174

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100 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bglu1 2 118112449 to 174483070 56370621 QTL blood glucose level 1
Scgq3 2 151867353 to 174547331 22679978 QTL spontaneous crescentic glomerulonephritis QTL 3
Cpgi12861 2 174415596 to 174416193 597 CpG island CpG island 12861
Nelfcd 2 174415804 to 174427502 11698 + protein coding gene negative elongation factor complex member C/D, Th1l
Tssr22147 2 174415815 to 174415871 56 + TSS region transcription start site region 22147
Tssr22148 2 174426290 to 174426295 5 + TSS region transcription start site region 22148
Tssr22149 2 174427492 to 174427497 5 + TSS region transcription start site region 22149
Ctsz 2 174427494 to 174439039 11545 - protein coding gene cathepsin Z
Tssr28015 2 174427816 to 174427834 18 - TSS region transcription start site region 28015
Tssr28016 2 174427878 to 174427890 12 - TSS region transcription start site region 28016
Tssr28017 2 174427955 to 174427984 29 - TSS region transcription start site region 28017
Tssr28018 2 174428626 to 174428643 17 - TSS region transcription start site region 28018
Tssr28019 2 174428660 to 174428682 22 - TSS region transcription start site region 28019
Tssr28020 2 174428692 to 174428705 13 - TSS region transcription start site region 28020
Tssr28021 2 174428730 to 174428743 13 - TSS region transcription start site region 28021
Tssr28022 2 174429075 to 174429132 57 - TSS region transcription start site region 28022
Tssr28023 2 174432429 to 174432441 12 - TSS region transcription start site region 28023
Tssr28024 2 174433548 to 174433572 24 - TSS region transcription start site region 28024
Tssr28025 2 174433627 to 174433652 25 - TSS region transcription start site region 28025
Tssr28026 2 174437774 to 174437776 2 - TSS region transcription start site region 28026
Tssr22150 2 174438201 to 174438262 61 + TSS region transcription start site region 22150
Tssr28027 2 174438307 to 174438339 32 - TSS region transcription start site region 28027
Cpgi12862 2 174438663 to 174439303 640 CpG island CpG island 12862
Tssr28028 2 174438897 to 174438938 41 - TSS region transcription start site region 28028
Tssr28029 2 174438940 to 174438959 19 - TSS region transcription start site region 28029
Tssr28030 2 174438961 to 174438995 34 - TSS region transcription start site region 28030
Tssr28031 2 174438996 to 174439029 33 - TSS region transcription start site region 28031
Tssr22151 2 174439074 to 174439126 52 + TSS region transcription start site region 22151
Tssr22152 2 174439706 to 174439727 21 + TSS region transcription start site region 22152
Rpl30-ps5 2 174440929 to 174441289 360 - pseudogene ribosomal protein L30, pseudogene 5
Tssr28032 2 174441350 to 174441360 10 - TSS region transcription start site region 28032
Tssr22153 2 174442231 to 174442238 7 + TSS region transcription start site region 22153
Tssr22154 2 174450678 to 174450708 30 + TSS region transcription start site region 22154
Tubb1 2 174450695 to 174457882 7187 + protein coding gene tubulin, beta 1 class VI
Cpgi12863 2 174456876 to 174457544 668 CpG island CpG island 12863
Atp5e 2 174461075 to 174464101 3026 - protein coding gene ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
Cpgi12864 2 174463656 to 174464380 724 CpG island CpG island 12864
Tssr28033 2 174464039 to 174464050 11 - TSS region transcription start site region 28033
Tssr28034 2 174464063 to 174464099 36 - TSS region transcription start site region 28034
Prelid3b 2 174465076 to 174472991 7915 - protein coding gene PRELI domain containing 3B
Cpgi12865 2 174472318 to 174473472 1154 CpG island CpG island 12865
Tssr28035 2 174472878 to 174472936 58 - TSS region transcription start site region 28035
Tssr28036 2 174472949 to 174473019 70 - TSS region transcription start site region 28036
Gm38546 2 174473176 to 174474109 933 + lncRNA gene predicted gene, 38546
D2Mit265 2 174482966 to 174483070 104 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 265
Gm14385 2 174484701 to 174485576 875 - pseudogene predicted gene 14385
Cpgi12866 2 174502934 to 174503139 205 CpG island CpG island 12866
Sls 2 174547204 to 178800659 4253455 heritable phenotypic marker semidominant lethal spotting
D2Mit213 2 174547204 to 174547331 127 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 213
Gm40015 2 174581925 to 174593773 11848 - lncRNA gene predicted gene, 40015
Vmn1r-ps1 2 174591230 to 174591802 572 + pseudogene vomeronasal 1 receptor, pseudogene 1
Tssr22155 2 174598653 to 174598674 21 + TSS region transcription start site region 22155
Tssr22156 2 174598695 to 174598726 31 + TSS region transcription start site region 22156
Gm46781 2 174602812 to 174611340 8528 - lncRNA gene predicted gene, 46781
Tssr28037 2 174614027 to 174614034 7 - TSS region transcription start site region 28037
Tssr28038 2 174614043 to 174614060 17 - TSS region transcription start site region 28038
Tssr28039 2 174614087 to 174614113 26 - TSS region transcription start site region 28039
Tssr22157 2 174614158 to 174614218 60 + TSS region transcription start site region 22157
Tssr28040 2 174614345 to 174614370 25 - TSS region transcription start site region 28040
Tssr28041 2 174614372 to 174614384 12 - TSS region transcription start site region 28041
Zfp831 2 174643534 to 174710832 67298 + protein coding gene zinc finger protein 831
D2Mit210 2 174650043 to 174650191 148 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 210
Cpgi12867 2 174674113 to 174674289 176 CpG island CpG island 12867
Tssr22158 2 174760366 to 174760379 13 + TSS region transcription start site region 22158
Cpgi12868 2 174760476 to 174761148 672 CpG island CpG island 12868
Edn3 2 174760619 to 174784042 23423 + protein coding gene endothelin 3
Tssr22159 2 174760752 to 174760780 28 + TSS region transcription start site region 22159
Tssr22160 2 174760781 to 174760796 15 + TSS region transcription start site region 22160
Tssr793 2 174774820 to 174774829 9 + TSS region transcription start site region 793
Tssr28042 2 174807859 to 174807868 9 - TSS region transcription start site region 28042
Gm14617 2 174835964 to 174841174 5210 - unclassified non-coding RNA gene predicted gene 14617
Gm14618 2 174842305 to 174853357 11052 - lincRNA gene predicted gene 14618
Tssr28043 2 174849987 to 174849993 6 - TSS region transcription start site region 28043
5730415C11Rik 2 174850639 to 174852467 1828 unclassified gene RIKEN cDNA 5730415C11 gene
Cpgi12869 2 174852027 to 174852308 281 CpG island CpG island 12869
Tssr28044 2 174853218 to 174853223 5 - TSS region transcription start site region 28044
Tssr28045 2 174853244 to 174853251 7 - TSS region transcription start site region 28045
Tssr28046 2 174853281 to 174853301 20 - TSS region transcription start site region 28046
Tssr28047 2 174853303 to 174853310 7 - TSS region transcription start site region 28047
Tssr28048 2 174853355 to 174853359 4 - TSS region transcription start site region 28048
Gm14616 2 174856289 to 174866531 10242 + lincRNA gene predicted gene 14616
Gm30537 2 174880354 to 174897109 16755 + lncRNA gene predicted gene, 30537
Gm40017 2 174918374 to 174974406 56032 + lncRNA gene predicted gene, 40017
Tssr28049 2 174927743 to 174927749 6 - TSS region transcription start site region 28049
D2Jpk5 2 174927967 to 174928179 212 DNA segment DNA segment, Chr 2, Japan, Kominami 5
Gm30591 2 174935150 to 174941949 6799 - lncRNA gene predicted gene, 30591
D2Mit517 2 174958522 to 174958615 93 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology-517
Gm14444 2 175010241 to 175019248 9007 + protein coding gene predicted gene 14444
Gm16354 2 175023354 to 175023503 149 - pseudogene predicted gene 16354
Gm14445 2 175038121 to 175041036 2915 + pseudogene predicted gene 14445
Gm14393 2 175061549 to 175067769 6220 - protein coding gene predicted gene 14393
Gm14439 2 175062436 to 175062876 440 + pseudogene predicted gene 14439
Gm14387 2 175086501 to 175089918 3417 + pseudogene predicted gene 14387
Gm14392 2 175104454 to 175110015 5561 - pseudogene predicted gene 14392
Gm14399 2 175129493 to 175142012 12519 - protein coding gene predicted gene 14399
Gm16355 2 175153998 to 175154228 230 + pseudogene predicted gene 16355
Gm14443 2 175166255 to 175175871 9616 - protein coding gene predicted gene 14443
Gm14391 2 175191065 to 175206917 15852 - protein coding gene predicted gene 14391
Gm14442 2 175228176 to 175231291 3115 - pseudogene predicted gene 14442
Gm14438 2 175270556 to 175271179 623 + pseudogene predicted gene 14438