Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:174382204-178965659

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277 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bglu1 2 118112449 to 174483070 56370621 QTL blood glucose level 1
Bhr1 2 142751556 to 178800659 36049103 QTL bronchial hyperresponsiveness 1
Scgq3 2 151867353 to 174547331 22679978 QTL spontaneous crescentic glomerulonephritis QTL 3
Nidd2k 2 158236417 to 178800659 20564242 QTL Nidd2 on KK-A
Epfq2 2 162895006 to 178800659 15905653 QTL epididymal fat pad weight QTL 2
Tailq4 2 162895006 to 178800659 15905653 QTL tail length QTL 4
Cpgi12861 2 174415596 to 174416193 597 CpG island CpG island 12861
Nelfcd 2 174415804 to 174427502 11698 + protein coding gene negative elongation factor complex member C/D, Th1l
Tssr22147 2 174415815 to 174415871 56 + TSS region transcription start site region 22147
Tssr22148 2 174426290 to 174426295 5 + TSS region transcription start site region 22148
Tssr22149 2 174427492 to 174427497 5 + TSS region transcription start site region 22149
Ctsz 2 174427494 to 174439039 11545 - protein coding gene cathepsin Z
Tssr28015 2 174427816 to 174427834 18 - TSS region transcription start site region 28015
Tssr28016 2 174427878 to 174427890 12 - TSS region transcription start site region 28016
Tssr28017 2 174427955 to 174427984 29 - TSS region transcription start site region 28017
Tssr28018 2 174428626 to 174428643 17 - TSS region transcription start site region 28018
Tssr28019 2 174428660 to 174428682 22 - TSS region transcription start site region 28019
Tssr28020 2 174428692 to 174428705 13 - TSS region transcription start site region 28020
Tssr28021 2 174428730 to 174428743 13 - TSS region transcription start site region 28021
Tssr28022 2 174429075 to 174429132 57 - TSS region transcription start site region 28022
Tssr28023 2 174432429 to 174432441 12 - TSS region transcription start site region 28023
Tssr28024 2 174433548 to 174433572 24 - TSS region transcription start site region 28024
Tssr28025 2 174433627 to 174433652 25 - TSS region transcription start site region 28025
Tssr28026 2 174437774 to 174437776 2 - TSS region transcription start site region 28026
Tssr22150 2 174438201 to 174438262 61 + TSS region transcription start site region 22150
Tssr28027 2 174438307 to 174438339 32 - TSS region transcription start site region 28027
Cpgi12862 2 174438663 to 174439303 640 CpG island CpG island 12862
Tssr28028 2 174438897 to 174438938 41 - TSS region transcription start site region 28028
Tssr28029 2 174438940 to 174438959 19 - TSS region transcription start site region 28029
Tssr28030 2 174438961 to 174438995 34 - TSS region transcription start site region 28030
Tssr28031 2 174438996 to 174439029 33 - TSS region transcription start site region 28031
Tssr22151 2 174439074 to 174439126 52 + TSS region transcription start site region 22151
Tssr22152 2 174439706 to 174439727 21 + TSS region transcription start site region 22152
Rpl30-ps5 2 174440929 to 174441289 360 - pseudogene ribosomal protein L30, pseudogene 5
Tssr28032 2 174441350 to 174441360 10 - TSS region transcription start site region 28032
Tssr22153 2 174442231 to 174442238 7 + TSS region transcription start site region 22153
Tssr22154 2 174450678 to 174450708 30 + TSS region transcription start site region 22154
Tubb1 2 174450695 to 174457882 7187 + protein coding gene tubulin, beta 1 class VI
Cpgi12863 2 174456876 to 174457544 668 CpG island CpG island 12863
Atp5e 2 174461075 to 174464101 3026 - protein coding gene ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
Cpgi12864 2 174463656 to 174464380 724 CpG island CpG island 12864
Tssr28033 2 174464039 to 174464050 11 - TSS region transcription start site region 28033
Tssr28034 2 174464063 to 174464099 36 - TSS region transcription start site region 28034
Prelid3b 2 174465076 to 174472991 7915 - protein coding gene PRELI domain containing 3B
Cpgi12865 2 174472318 to 174473472 1154 CpG island CpG island 12865
Tssr28035 2 174472878 to 174472936 58 - TSS region transcription start site region 28035
Tssr28036 2 174472949 to 174473019 70 - TSS region transcription start site region 28036
Gm38546 2 174473176 to 174474109 933 + lncRNA gene predicted gene, 38546
D2Mit265 2 174482966 to 174483070 104 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 265
Gm14385 2 174484701 to 174485576 875 - pseudogene predicted gene 14385
Cpgi12866 2 174502934 to 174503139 205 CpG island CpG island 12866
D2Mit213 2 174547204 to 174547331 127 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 213
Sls 2 174547204 to 178800659 4253455 heritable phenotypic marker semidominant lethal spotting
Gm40015 2 174581925 to 174593773 11848 - lncRNA gene predicted gene, 40015
Vmn1r-ps1 2 174591230 to 174591802 572 + pseudogene vomeronasal 1 receptor, pseudogene 1
Tssr22155 2 174598653 to 174598674 21 + TSS region transcription start site region 22155
Tssr22156 2 174598695 to 174598726 31 + TSS region transcription start site region 22156
Gm46781 2 174602812 to 174611340 8528 - lncRNA gene predicted gene, 46781
Tssr28037 2 174614027 to 174614034 7 - TSS region transcription start site region 28037
Tssr28038 2 174614043 to 174614060 17 - TSS region transcription start site region 28038
Tssr28039 2 174614087 to 174614113 26 - TSS region transcription start site region 28039
Tssr22157 2 174614158 to 174614218 60 + TSS region transcription start site region 22157
Tssr28040 2 174614345 to 174614370 25 - TSS region transcription start site region 28040
Tssr28041 2 174614372 to 174614384 12 - TSS region transcription start site region 28041
Zfp831 2 174643534 to 174710832 67298 + protein coding gene zinc finger protein 831
D2Mit210 2 174650043 to 174650191 148 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 210
Cpgi12867 2 174674113 to 174674289 176 CpG island CpG island 12867
Tssr22158 2 174760366 to 174760379 13 + TSS region transcription start site region 22158
Cpgi12868 2 174760476 to 174761148 672 CpG island CpG island 12868
Edn3 2 174760619 to 174784042 23423 + protein coding gene endothelin 3
Tssr22159 2 174760752 to 174760780 28 + TSS region transcription start site region 22159
Tssr22160 2 174760781 to 174760796 15 + TSS region transcription start site region 22160
Tssr793 2 174774820 to 174774829 9 + TSS region transcription start site region 793
Tssr28042 2 174807859 to 174807868 9 - TSS region transcription start site region 28042
Gm14617 2 174835964 to 174841174 5210 - unclassified non-coding RNA gene predicted gene 14617
Gm14618 2 174842305 to 174853357 11052 - lincRNA gene predicted gene 14618
Tssr28043 2 174849987 to 174849993 6 - TSS region transcription start site region 28043
5730415C11Rik 2 174850639 to 174852467 1828 unclassified gene RIKEN cDNA 5730415C11 gene
Cpgi12869 2 174852027 to 174852308 281 CpG island CpG island 12869
Tssr28044 2 174853218 to 174853223 5 - TSS region transcription start site region 28044
Tssr28045 2 174853244 to 174853251 7 - TSS region transcription start site region 28045
Tssr28046 2 174853281 to 174853301 20 - TSS region transcription start site region 28046
Tssr28047 2 174853303 to 174853310 7 - TSS region transcription start site region 28047
Tssr28048 2 174853355 to 174853359 4 - TSS region transcription start site region 28048
Gm14616 2 174856289 to 174866531 10242 + lincRNA gene predicted gene 14616
Gm30537 2 174880354 to 174897109 16755 + lncRNA gene predicted gene, 30537
Gm40017 2 174918374 to 174974406 56032 + lncRNA gene predicted gene, 40017
Tssr28049 2 174927743 to 174927749 6 - TSS region transcription start site region 28049
D2Jpk5 2 174927967 to 174928179 212 DNA segment DNA segment, Chr 2, Japan, Kominami 5
Gm30591 2 174935150 to 174941949 6799 - lncRNA gene predicted gene, 30591
D2Mit517 2 174958522 to 174958615 93 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology-517
Gm14444 2 175010241 to 175019248 9007 + protein coding gene predicted gene 14444
Gm16354 2 175023354 to 175023503 149 - pseudogene predicted gene 16354
Gm14445 2 175038121 to 175041036 2915 + pseudogene predicted gene 14445
Gm14393 2 175061549 to 175067769 6220 - protein coding gene predicted gene 14393
Gm14439 2 175062436 to 175062876 440 + pseudogene predicted gene 14439
Gm14387 2 175086501 to 175089918 3417 + pseudogene predicted gene 14387
Gm14392 2 175104454 to 175110015 5561 - pseudogene predicted gene 14392
Gm14399 2 175129493 to 175142012 12519 - protein coding gene predicted gene 14399
Gm16355 2 175153998 to 175154228 230 + pseudogene predicted gene 16355
Gm14443 2 175166255 to 175175871 9616 - protein coding gene predicted gene 14443
Gm14391 2 175191065 to 175206917 15852 - protein coding gene predicted gene 14391
Gm14442 2 175228176 to 175231291 3115 - pseudogene predicted gene 14442
Gm14438 2 175270556 to 175271179 623 + pseudogene predicted gene 14438
Gm14440 2 175275125 to 175286805 11680 + protein coding gene predicted gene 14440
Gm14298 2 175304097 to 175304333 236 - pseudogene predicted gene 14298
Gm46795 2 175314700 to 175317824 3124 - lncRNA gene predicted gene, 46795
Gm4631 2 175322344 to 175338300 15956 - protein coding gene predicted gene 4631
Zfp968 2 175372436 to 175384201 11765 + protein coding gene zinc finger protein 968
Gm14297 2 175401664 to 175401954 290 - pseudogene predicted gene 14297
Gm46792 2 175412257 to 175415381 3124 - lncRNA gene predicted gene, 46792
Gm4724 2 175422300 to 175435807 13507 - protein coding gene predicted gene 4724
Zfp965 2 175470025 to 175480553 10528 + protein coding gene zinc finger protein 965
Gm11007 2 175643978 to 175653860 9882 + protein coding gene predicted gene 11007
Gm46794 2 175660779 to 175663903 3124 + lncRNA gene predicted gene, 46794
Gm16359 2 175674203 to 175674491 288 + pseudogene predicted gene 16359
Zfp969 2 175692223 to 175703646 11423 - protein coding gene zinc finger protein 969
Gm2007 2 175741537 to 175751419 9882 + protein coding gene predicted gene 2007
Gm46793 2 175758338 to 175761462 3124 + lncRNA gene predicted gene, 46793
Gm16358 2 175771853 to 175772062 209 + pseudogene predicted gene 16358
Gm14288 2 175790548 to 175801038 10490 - protein coding gene predicted gene 14288
Rps8-ps2 2 175804983 to 175805606 623 - pseudogene ribosomal protein S8, pseudogene 2
Gm2020 2 175846713 to 175847991 1278 + pseudogene predicted gene 2020
Gm6710 2 175869219 to 175881248 12029 + protein coding gene predicted gene 6710
Tssr22161 2 175869281 to 175869294 13 + TSS region transcription start site region 22161
Gm42247 2 175888166 to 175891290 3124 + lncRNA gene predicted gene, 42247
Gm16356 2 175901725 to 175901893 168 + pseudogene predicted gene 16356
Zfp966 2 175918881 to 175931100 12219 - protein coding gene zinc finger protein 966
Gm2026 2 175965331 to 175980303 14972 + protein coding gene predicted gene 2026
Gm11008 2 176097450 to 176100706 3256 + lincRNA gene predicted gene 11008
Gm16357 2 176116023 to 176117866 1843 - pseudogene predicted gene 16357
Gm36391 2 176132091 to 176134711 2620 - lncRNA gene predicted gene, 36391
Gm2004 2 176141591 to 176149825 8234 - protein coding gene predicted gene 2004
Gm42249 2 176181123 to 176203875 22752 + pseudogene predicted gene, 42249
Gm6182 2 176201042 to 176203572 2530 + pseudogene predicted gene 6182
2210418O10Rik 2 176226569 to 176240328 13759 + protein coding gene RIKEN cDNA 2210418O10 gene
Gm17258 2 176257249 to 176258516 1267 + pseudogene predicted gene, 17258
Gm1980 2 176298827 to 176302568 3741 + pseudogene predicted gene 1980
Gm11009 2 176317638 to 176319494 1856 - protein coding gene predicted gene 11009
Gm14435 2 176423594 to 176435761 12167 + protein coding gene predicted gene 14435
Gm16362 2 176452627 to 176452840 213 - pseudogene predicted gene 16362
Gm41982 2 176463235 to 176466359 3124 - lncRNA gene predicted gene, 41982
Gm14434 2 176473278 to 176486783 13505 - protein coding gene predicted gene 14434
Zfp967 2 176521056 to 176532479 11423 + protein coding gene zinc finger protein 967
Gm14307 2 176602206 to 176602496 290 - pseudogene predicted gene 14307
Gm41983 2 176612799 to 176615923 3124 - lncRNA gene predicted gene, 41983
Gm14308 2 176619933 to 176636319 16386 - protein coding gene predicted gene 14308
Zfp973 2 176670522 to 176681090 10568 + protein coding gene zinc finger protein 973
Gm14305 2 176708353 to 176721813 13460 + protein coding gene predicted gene 14305
Gm14301 2 176742172 to 176742495 323 + pseudogene predicted gene 14301
Gm14390 2 176754436 to 176755730 1294 - pseudogene predicted gene 14390
Gm14295 2 176798612 to 176811223 12611 + protein coding gene predicted gene 14295
Gm14408 2 176831140 to 176836730 5590 + protein coding gene predicted gene 14408
Gm14405 2 176851851 to 176855548 3697 - pseudogene predicted gene 14405
Gm41984 2 176876911 to 176892225 15314 + lncRNA gene predicted gene, 41984
Gm14296 2 176892509 to 176927809 35300 - protein coding gene predicted gene 14296
Gm17961 2 176949879 to 176950715 836 - pseudogene predicted gene, 17961
Gm14417 2 176950908 to 176953323 2415 - pseudogene predicted gene 14417
Gm14419 2 177000956 to 177012787 11831 + protein coding gene predicted gene 14419
Gm36055 2 177019667 to 177022287 2620 + lncRNA gene predicted gene, 36055
Gm14402 2 177032655 to 177038354 5699 + pseudogene predicted gene 14402
Gm14421 2 177054064 to 177056510 2446 - pseudogene predicted gene 14421
Tssr22162 2 177074263 to 177074291 28 + TSS region transcription start site region 22162
Gm14407 2 177085356 to 177085802 446 - pseudogene predicted gene 14407
Gm14401 2 177086318 to 177087605 1287 + protein coding gene predicted gene 14401
Gm14415 2 177103564 to 177106488 2924 - pseudogene predicted gene 14415
Gm14411 2 177125463 to 177127709 2246 - pseudogene predicted gene 14411
Gm14416 2 177138660 to 177142331 3671 + pseudogene predicted gene 14416
Gm14413 2 177167290 to 177172870 5580 - pseudogene predicted gene 14413
Gm46790 2 177183453 to 177186506 3053 - lncRNA gene predicted gene, 46790
Gm14410 2 177201444 to 177206502 5058 - protein coding gene predicted gene 14410
Gm14400 2 177225473 to 177228963 3490 - pseudogene predicted gene 14400
Gm14409 2 177264654 to 177267036 2382 - protein coding gene predicted gene 14409
Gm41987 2 177301042 to 177307559 6517 - lncRNA gene predicted gene, 41987
Gm14412 2 177314520 to 177324307 9787 - protein coding gene predicted gene 14412
Gm41986 2 177322532 to 177341617 19085 + lncRNA gene predicted gene, 41986
Tssr28050 2 177329843 to 177329863 20 - TSS region transcription start site region 28050
Gm14418 2 177387124 to 177398320 11196 - protein coding gene predicted gene 14418
Tssr28051 2 177398310 to 177398340 30 - TSS region transcription start site region 28051
Gm14404 2 177419902 to 177422936 3034 - pseudogene predicted gene 14404
Tssr22163 2 177460194 to 177460196 2 + TSS region transcription start site region 22163
Gm14414 2 177460275 to 177460847 572 + pseudogene predicted gene 14414
Zfp970 2 177464733 to 177478129 13396 + protein coding gene zinc finger protein 970
Gm14403 2 177498215 to 177509763 11548 + protein coding gene predicted gene 14403
Gm16363 2 177541681 to 177542557 876 - pseudogene predicted gene 16363
Gm14406 2 177569204 to 177578210 9006 - protein coding gene predicted gene 14406
Gm14324 2 177734300 to 177738757 4457 + pseudogene predicted gene 14324
Tssr22164 2 177759254 to 177759293 39 + TSS region transcription start site region 22164
Gm14322 2 177759288 to 177770472 11184 + protein coding gene predicted gene 14322
Tssr794 2 177764030 to 177764032 2 + TSS region transcription start site region 794
Gm14325 2 177831791 to 177840336 8545 - protein coding gene predicted gene 14325
Tssr28052 2 177840344 to 177840354 10 - TSS region transcription start site region 28052
Gm14429 2 177852152 to 177855503 3351 - pseudogene predicted gene 14429
Gm14323 2 177892638 to 177893264 626 + pseudogene predicted gene 14323
Gm14327 2 177897096 to 177905784 8688 + protein coding gene predicted gene 14327
Zfp972 2 177903340 to 177925613 22273 - protein coding gene zinc finger protein 972
Gm14326 2 177935993 to 177957297 21304 - protein coding gene predicted gene 14326
Tssr28053 2 177939017 to 177939020 3 - TSS region transcription start site region 28053
Tssr28054 2 177957285 to 177957312 27 - TSS region transcription start site region 28054
Gm14428 2 177980534 to 177982700 2166 - pseudogene predicted gene 14428