Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:174320596-174511193

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bglu1 2 118112449 to 174483070 56370621 QTL blood glucose level 1
Gnas 2 174284320 to 174346744 62424 + protein coding gene GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
Gm30189 2 174320908 to 174327388 6480 - lncRNA gene predicted gene, 30189
Cpgi12859 2 174327125 to 174328080 955 CpG island CpG island 12859
Tssr28010 2 174327348 to 174327362 14 - TSS region transcription start site region 28010
Tssr28011 2 174327372 to 174327419 47 - TSS region transcription start site region 28011
Tssr22122 2 174327558 to 174327575 17 + TSS region transcription start site region 22122
Tssr22123 2 174327726 to 174327729 3 + TSS region transcription start site region 22123
Tssr22124 2 174327747 to 174327763 16 + TSS region transcription start site region 22124
Tssr22125 2 174328200 to 174328211 11 + TSS region transcription start site region 22125
Cpgi12860 2 174328350 to 174331182 2832 CpG island CpG island 12860
Tssr22126 2 174329362 to 174329411 49 + TSS region transcription start site region 22126
Tssr22127 2 174329983 to 174329994 11 + TSS region transcription start site region 22127
Tssr22128 2 174330012 to 174330047 35 + TSS region transcription start site region 22128
Tssr22129 2 174330048 to 174330059 11 + TSS region transcription start site region 22129
Tssr22130 2 174330067 to 174330098 31 + TSS region transcription start site region 22130
Tssr22131 2 174330111 to 174330126 15 + TSS region transcription start site region 22131
Tssr22132 2 174330186 to 174330197 11 + TSS region transcription start site region 22132
Gm20721 2 174330319 to 174346712 16393 - protein coding gene predicted gene, 20721
Tssr22133 2 174336741 to 174336764 23 + TSS region transcription start site region 22133
Tssr791 2 174339330 to 174339354 24 + TSS region transcription start site region 791
Tssr28012 2 174341678 to 174341705 27 - TSS region transcription start site region 28012
Tssr22134 2 174341811 to 174341868 57 + TSS region transcription start site region 22134
Tssr22135 2 174343227 to 174343265 38 + TSS region transcription start site region 22135
Tssr22136 2 174344379 to 174344403 24 + TSS region transcription start site region 22136
Tssr28013 2 174345113 to 174345129 16 - TSS region transcription start site region 28013
Tssr22137 2 174345392 to 174345451 59 + TSS region transcription start site region 22137
Tssr28014 2 174345476 to 174345540 64 - TSS region transcription start site region 28014
Tssr22138 2 174345488 to 174345516 28 + TSS region transcription start site region 22138
Tssr22139 2 174346000 to 174346033 33 + TSS region transcription start site region 22139
Tssr22140 2 174346254 to 174346314 60 + TSS region transcription start site region 22140
Tssr22141 2 174346317 to 174346333 16 + TSS region transcription start site region 22141
Tssr792 2 174346334 to 174346350 16 + TSS region transcription start site region 792
Tssr22142 2 174346357 to 174346370 13 + TSS region transcription start site region 22142
Tssr22143 2 174346452 to 174346515 63 + TSS region transcription start site region 22143
Tssr22144 2 174346567 to 174346580 13 + TSS region transcription start site region 22144
Tssr22145 2 174346596 to 174346601 5 + TSS region transcription start site region 22145
Tssr22146 2 174346602 to 174346638 36 + TSS region transcription start site region 22146
Cpgi12861 2 174415596 to 174416193 597 CpG island CpG island 12861
Nelfcd 2 174415804 to 174427502 11698 + protein coding gene negative elongation factor complex member C/D, Th1l
Tssr22147 2 174415815 to 174415871 56 + TSS region transcription start site region 22147
Tssr22148 2 174426290 to 174426295 5 + TSS region transcription start site region 22148
Tssr22149 2 174427492 to 174427497 5 + TSS region transcription start site region 22149
Ctsz 2 174427494 to 174439039 11545 - protein coding gene cathepsin Z
Tssr28015 2 174427816 to 174427834 18 - TSS region transcription start site region 28015
Tssr28016 2 174427878 to 174427890 12 - TSS region transcription start site region 28016
Tssr28017 2 174427955 to 174427984 29 - TSS region transcription start site region 28017
Tssr28018 2 174428626 to 174428643 17 - TSS region transcription start site region 28018
Tssr28019 2 174428660 to 174428682 22 - TSS region transcription start site region 28019
Tssr28020 2 174428692 to 174428705 13 - TSS region transcription start site region 28020
Tssr28021 2 174428730 to 174428743 13 - TSS region transcription start site region 28021
Tssr28022 2 174429075 to 174429132 57 - TSS region transcription start site region 28022
Tssr28023 2 174432429 to 174432441 12 - TSS region transcription start site region 28023
Tssr28024 2 174433548 to 174433572 24 - TSS region transcription start site region 28024
Tssr28025 2 174433627 to 174433652 25 - TSS region transcription start site region 28025
Tssr28026 2 174437774 to 174437776 2 - TSS region transcription start site region 28026
Tssr22150 2 174438201 to 174438262 61 + TSS region transcription start site region 22150
Tssr28027 2 174438307 to 174438339 32 - TSS region transcription start site region 28027
Cpgi12862 2 174438663 to 174439303 640 CpG island CpG island 12862
Tssr28028 2 174438897 to 174438938 41 - TSS region transcription start site region 28028
Tssr28029 2 174438940 to 174438959 19 - TSS region transcription start site region 28029
Tssr28030 2 174438961 to 174438995 34 - TSS region transcription start site region 28030
Tssr28031 2 174438996 to 174439029 33 - TSS region transcription start site region 28031
Tssr22151 2 174439074 to 174439126 52 + TSS region transcription start site region 22151
Tssr22152 2 174439706 to 174439727 21 + TSS region transcription start site region 22152
Rpl30-ps5 2 174440929 to 174441289 360 - pseudogene ribosomal protein L30, pseudogene 5
Tssr28032 2 174441350 to 174441360 10 - TSS region transcription start site region 28032
Tssr22153 2 174442231 to 174442238 7 + TSS region transcription start site region 22153
Tssr22154 2 174450678 to 174450708 30 + TSS region transcription start site region 22154
Tubb1 2 174450695 to 174457882 7187 + protein coding gene tubulin, beta 1 class VI
Cpgi12863 2 174456876 to 174457544 668 CpG island CpG island 12863
Atp5e 2 174461075 to 174464101 3026 - protein coding gene ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
Cpgi12864 2 174463656 to 174464380 724 CpG island CpG island 12864
Tssr28033 2 174464039 to 174464050 11 - TSS region transcription start site region 28033
Tssr28034 2 174464063 to 174464099 36 - TSS region transcription start site region 28034
Prelid3b 2 174465076 to 174472991 7915 - protein coding gene PRELI domain containing 3B
Cpgi12865 2 174472318 to 174473472 1154 CpG island CpG island 12865
Tssr28035 2 174472878 to 174472936 58 - TSS region transcription start site region 28035
Tssr28036 2 174472949 to 174473019 70 - TSS region transcription start site region 28036
Gm38546 2 174473176 to 174474109 933 + lncRNA gene predicted gene, 38546
D2Mit265 2 174482966 to 174483070 104 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 265
Gm14385 2 174484701 to 174485576 875 - pseudogene predicted gene 14385
Cpgi12866 2 174502934 to 174503139 205 CpG island CpG island 12866