Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:173281721-173591730

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46780 2 173288383 to 173290130 1747 - lncRNA gene predicted gene, 46780
Gm36859 2 173290295 to 173291597 1302 - lncRNA gene predicted gene, 36859
Tssr785 2 173291120 to 173291133 13 - TSS region transcription start site region 785
Tssr27990 2 173291137 to 173291168 31 - TSS region transcription start site region 27990
Tssr27991 2 173291175 to 173291180 5 - TSS region transcription start site region 27991
Tssr22054 2 173291227 to 173291258 31 + TSS region transcription start site region 22054
1700039O17Rik 2 173291254 to 173291595 341 unclassified gene RIKEN cDNA 1700039O17 gene
4932434E15Rik 2 173295532 to 173298983 3451 unclassified non-coding RNA gene RIKEN cDNA 4932434E15 gene
Tssr27992 2 173305129 to 173305145 16 - TSS region transcription start site region 27992
Gm36911 2 173346809 to 173370431 23622 + lncRNA gene predicted gene, 36911
Tssr27993 2 173348901 to 173348907 6 - TSS region transcription start site region 27993
Lith12 2 173354671 to 173354817 146 QTL lithogenic gene 12
D2Mit113 2 173354671 to 173354817 146 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 113
D2Mit502 2 173369625 to 173369769 144 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 502
Gm29859 2 173373339 to 173377890 4551 - lncRNA gene predicted gene, 29859
Gm14642 2 173394566 to 173395720 1154 + lincRNA gene predicted gene 14642
Tssr22055 2 173407056 to 173407067 11 + TSS region transcription start site region 22055
Cpgi12843 2 173413935 to 173414105 170 CpG island CpG island 12843
Tssr27994 2 173436721 to 173436730 9 - TSS region transcription start site region 27994
Cpgi12844 2 173522546 to 173522743 197 CpG island CpG island 12844
Tssr22056 2 173522575 to 173522581 6 + TSS region transcription start site region 22056
Tssr22057 2 173522588 to 173522618 30 + TSS region transcription start site region 22057
1700021F07Rik 2 173522592 to 173528502 5910 + protein coding gene RIKEN cDNA 1700021F07 gene
Tssr22058 2 173522622 to 173522635 13 + TSS region transcription start site region 22058
Tssr22059 2 173522663 to 173522671 8 + TSS region transcription start site region 22059
Cpgi12845 2 173535364 to 173535607 243 CpG island CpG island 12845
Ankrd60 2 173568661 to 173578341 9680 - protein coding gene ankyrin repeat domain 60
Cpgi12846 2 173577789 to 173578815 1026 CpG island CpG island 12846
Tssr27995 2 173578171 to 173578180 9 - TSS region transcription start site region 27995
Tssr27996 2 173578188 to 173578199 11 - TSS region transcription start site region 27996
Tssr27997 2 173578203 to 173578211 8 - TSS region transcription start site region 27997
Tssr27998 2 173578215 to 173578278 63 - TSS region transcription start site region 27998
Tssr27999 2 173578300 to 173578334 34 - TSS region transcription start site region 27999
Ppp4r1l-ps 2 173579320 to 173659539 80219 - pseudogene protein phosphatase 4, regulatory subunit 1-like, pseudogene
Cpgi12847 2 173585310 to 173586933 1623 CpG island CpG island 12847