Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:172635046-173015381

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr21974 2 172643939 to 172643953 14 + TSS region transcription start site region 21974
Tssr21975 2 172646641 to 172646654 13 + TSS region transcription start site region 21975
Gm36156 2 172663816 to 172668447 4631 + lncRNA gene predicted gene, 36156
D2Mit173 2 172701876 to 172702152 276 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 173
D2Mit173.1 2 172701922 to 172702036 114 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 173.1
Cpgi12826 2 172728150 to 172728988 838 CpG island CpG island 12826
Cpgi12827 2 172731410 to 172731611 201 CpG island CpG island 12827
Cpgi12828 2 172739496 to 172739679 183 CpG island CpG island 12828
Cpgi12829 2 172787613 to 172787993 380 CpG island CpG island 12829
Tssr27949 2 172806670 to 172806677 7 - TSS region transcription start site region 27949
Tssr27950 2 172806825 to 172806832 7 - TSS region transcription start site region 27950
Cpgi12830 2 172825046 to 172825381 335 CpG island CpG island 12830
Cpgi12831 2 172845905 to 172846260 355 CpG island CpG island 12831
Gm36254 2 172848625 to 172864252 15627 - lncRNA gene predicted gene, 36254
1700055K11Rik 2 172859957 to 172863123 3166 + lncRNA gene RIKEN cDNA 1700055K11 gene
Cpgi12832 2 172862497 to 172863713 1216 CpG island CpG island 12832
Gm22773 2 172864264 to 172864341 77 - miRNA gene predicted gene, 22773
Bmp7 2 172868012 to 172940321 72309 - protein coding gene bone morphogenetic protein 7
Tssr27951 2 172869438 to 172869478 40 - TSS region transcription start site region 27951
Tssr27952 2 172901972 to 172901986 14 - TSS region transcription start site region 27952
Gm40010 2 172930521 to 172939645 9124 - lncRNA gene predicted gene, 40010
Cpgi12833 2 172934095 to 172934424 329 CpG island CpG island 12833
Cpgi12834 2 172938604 to 172941073 2469 CpG island CpG island 12834
Tssr21976 2 172938779 to 172938808 29 + TSS region transcription start site region 21976
Tssr27953 2 172940013 to 172940049 36 - TSS region transcription start site region 27953
Tssr27954 2 172940052 to 172940098 46 - TSS region transcription start site region 27954
Tssr27955 2 172940299 to 172940349 50 - TSS region transcription start site region 27955
Tssr27956 2 172940395 to 172940406 11 - TSS region transcription start site region 27956
Tssr27957 2 172940561 to 172940617 56 - TSS region transcription start site region 27957
Tssr21977 2 172949735 to 172949742 7 + TSS region transcription start site region 21977
Tssr780 2 172972503 to 172972504 1 + TSS region transcription start site region 780
Tssr21978 2 172977553 to 172977558 5 + TSS region transcription start site region 21978
Tssr21979 2 172977625 to 172977632 7 + TSS region transcription start site region 21979
Tssr21980 2 172977653 to 172977676 23 + TSS region transcription start site region 21980
Tssr21981 2 172977682 to 172977695 13 + TSS region transcription start site region 21981
Tssr21982 2 172977700 to 172977711 11 + TSS region transcription start site region 21982
Spo11 2 172977700 to 172993576 15876 + protein coding gene SPO11 meiotic protein covalently bound to DSB
Tssr21983 2 172977731 to 172977751 20 + TSS region transcription start site region 21983
Tssr21984 2 172977758 to 172977789 31 + TSS region transcription start site region 21984
Tssr21985 2 172977852 to 172977863 11 + TSS region transcription start site region 21985
Tssr21986 2 172977875 to 172977901 26 + TSS region transcription start site region 21986
Tssr21987 2 172977908 to 172977922 14 + TSS region transcription start site region 21987
Tssr27958 2 172978341 to 172978381 40 - TSS region transcription start site region 27958
Cpgi12835 2 172979767 to 172980176 409 CpG island CpG island 12835
Tssr21988 2 172979827 to 172979879 52 + TSS region transcription start site region 21988
D2Mit528.2 2 172982035 to 172982146 111 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 528.2
D2Mit528 2 172982127 to 172982222 95 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 528
Cfld1 2 172982127 to 172982222 95 QTL cystic fibrosis lung disease 1
Tssr21989 2 172992717 to 172992719 2 + TSS region transcription start site region 21989
Cpgi12836 2 172999715 to 173000981 1266 CpG island CpG island 12836
Tssr21990 2 173000114 to 173000125 11 + TSS region transcription start site region 21990
Rae1 2 173000117 to 173015739 15622 + protein coding gene ribonucleic acid export 1
Tssr21991 2 173000131 to 173000178 47 + TSS region transcription start site region 21991
Tssr21992 2 173006092 to 173006099 7 + TSS region transcription start site region 21992