Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:172430578-172479899

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cass4	2	172393794 to 172433757	39963	+	protein coding gene	Cas scaffolding protein family member 4
Gm14455	2	172425804 to 172440560	14756	-	antisense lncRNA gene	predicted gene 14455
Cpgi12821	2	172440258 to 172441010	752		CpG island	CpG island 12821
Tssr27946	2	172440516 to 172440529	13	-	TSS region	transcription start site region 27946
Tssr21953	2	172440565 to 172440630	65	+	TSS region	transcription start site region 21953
Rtf2	2	172440578 to 172469899	29321	+	protein coding gene	replication termination factor 2
Tssr21954	2	172440650 to 172440657	7	+	TSS region	transcription start site region 21954
Tssr21955	2	172442190 to 172442197	7	+	TSS region	transcription start site region 21955
Gcnt7	2	172450313 to 172458596	8283	-	protein coding gene	glucosaminyl (N-acetyl) transferase family member 7
Tssr21956	2	172455489 to 172455496	7	+	TSS region	transcription start site region 21956
Tssr21957	2	172461364 to 172461394	30	+	TSS region	transcription start site region 21957
Tssr27947	2	172463251 to 172463297	46	-	TSS region	transcription start site region 27947
Tssr21958	2	172472512 to 172472535	23	+	TSS region	transcription start site region 21958
Tssr21959	2	172472538 to 172472553	15	+	TSS region	transcription start site region 21959
Fam209	2	172472554 to 172474316	1762	+	protein coding gene	family with sequence similarity 209
Tssr21960	2	172472555 to 172472567	12	+	TSS region	transcription start site region 21960