Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:172361111-172441123

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aurka 2 172356190 to 172370535 14345 - protein coding gene aurora kinase A
Cpgi12820 2 172370109 to 172371381 1272 CpG island CpG island 12820
Tssr27940 2 172370514 to 172370540 26 - TSS region transcription start site region 27940
Tssr21948 2 172370645 to 172370656 11 + TSS region transcription start site region 21948
Tssr21949 2 172370658 to 172370744 86 + TSS region transcription start site region 21949
Cstf1 2 172370686 to 172382449 11763 + protein coding gene cleavage stimulation factor, 3' pre-RNA, subunit 1
Tssr27941 2 172370878 to 172370922 44 - TSS region transcription start site region 27941
Tssr21950 2 172370939 to 172370985 46 + TSS region transcription start site region 21950
Cass4 2 172393794 to 172433757 39963 + protein coding gene Cas scaffolding protein family member 4
Tssr21951 2 172393802 to 172393829 27 + TSS region transcription start site region 21951
Tssr21952 2 172393948 to 172393964 16 + TSS region transcription start site region 21952
D2Mit147 2 172394708 to 172394821 113 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 147
Tssr27942 2 172396010 to 172396050 40 - TSS region transcription start site region 27942
Tssr27943 2 172398060 to 172398065 5 - TSS region transcription start site region 27943
Tssr778 2 172398207 to 172398229 22 + TSS region transcription start site region 778
Tssr779 2 172399435 to 172399443 8 + TSS region transcription start site region 779
Tssr27944 2 172401111 to 172401123 12 - TSS region transcription start site region 27944
Tssr27945 2 172401124 to 172401136 12 - TSS region transcription start site region 27945
Gm14455 2 172425804 to 172440560 14756 - antisense lncRNA gene predicted gene 14455
Cpgi12821 2 172440258 to 172441010 752 CpG island CpG island 12821
Tssr27946 2 172440516 to 172440529 13 - TSS region transcription start site region 27946
Tssr21953 2 172440565 to 172440630 65 + TSS region transcription start site region 21953
Rtf2 2 172440578 to 172469899 29321 + protein coding gene replication termination factor 2
Tssr21954 2 172440650 to 172440657 7 + TSS region transcription start site region 21954