MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:172345645-172395656

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi12819	2	172345315 to 172346383	1068		CpG island	CpG island 12819
Fam210b	2	172345570 to 172355749	10179	+	protein coding gene	family with sequence similarity 210, member B
Tssr21946	2	172345628 to 172345647	19	+	TSS region	transcription start site region 21946
Tssr27939	2	172345670 to 172345683	13	-	TSS region	transcription start site region 27939
Tssr21947	2	172353289 to 172353296	7	+	TSS region	transcription start site region 21947
Aurka	2	172356190 to 172370535	14345	-	protein coding gene	aurora kinase A
Cpgi12820	2	172370109 to 172371381	1272		CpG island	CpG island 12820
Tssr27940	2	172370514 to 172370540	26	-	TSS region	transcription start site region 27940
Tssr21948	2	172370645 to 172370656	11	+	TSS region	transcription start site region 21948
Tssr21949	2	172370658 to 172370744	86	+	TSS region	transcription start site region 21949
Cstf1	2	172370686 to 172382449	11763	+	protein coding gene	cleavage stimulation factor, 3' pre-RNA, subunit 1
Tssr27941	2	172370878 to 172370922	44	-	TSS region	transcription start site region 27941
Tssr21950	2	172370939 to 172370985	46	+	TSS region	transcription start site region 21950
Cass4	2	172393794 to 172433757	39963	+	protein coding gene	Cas scaffolding protein family member 4
Tssr21951	2	172393802 to 172393829	27	+	TSS region	transcription start site region 21951
Tssr21952	2	172393948 to 172393964	16	+	TSS region	transcription start site region 21952
D2Mit147	2	172394708 to 172394821	113		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 147