MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:171960641-172240825

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
1700028P15Rik	2	171956879 to 171962799	5920	-	lncRNA gene	RIKEN cDNA 1700028P15 gene
Tssr27935	2	171962814 to 171962828	14	-	TSS region	transcription start site region 27935
Gm40005	2	171962901 to 171965622	2721	+	lncRNA gene	predicted gene, 40005
Gm14272	2	171988195 to 171989195	1000	-	lincRNA gene	predicted gene 14272
Gm14641	2	171995941 to 172003995	8054	-	lincRNA gene	predicted gene 14641
Tssr21939	2	172006931 to 172006964	33	+	TSS region	transcription start site region 21939
Cbln4	2	172036336 to 172043466	7130	-	protein coding gene	cerebellin 4 precursor protein
Cpgi12814	2	172041821 to 172043612	1791		CpG island	CpG island 12814
Tssr27936	2	172043046 to 172043061	15	-	TSS region	transcription start site region 27936
Tssr27937	2	172043129 to 172043148	19	-	TSS region	transcription start site region 27937
Gm14271	2	172046526 to 172050134	3608	+	antisense lncRNA gene	predicted gene 14271
Tssr777	2	172100539 to 172100549	10	+	TSS region	transcription start site region 777
Tssr21940	2	172100611 to 172100627	16	+	TSS region	transcription start site region 21940
Gm14274	2	172100621 to 172101235	614	+	pseudogene	predicted gene 14274
Cpgi12815	2	172100641 to 172100825	184		CpG island	CpG island 12815
Gm40006	2	172116575 to 172117195	620	+	lncRNA gene	predicted gene, 40006
Gm35719	2	172154601 to 172156413	1812	-	lncRNA gene	predicted gene, 35719
Gm44301	2	172176782 to 172176924	142	+	miRNA gene	predicted gene, 44301
Tssr27938	2	172225738 to 172225739	1	-	TSS region	transcription start site region 27938