Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:170504155-171046838

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pfdn4 2 170496428 to 170519070 22642 + protein coding gene prefoldin 4
Gm16796 2 170499357 to 170511927 12570 - antisense lncRNA gene predicted gene, 16796
Cpgi12807 2 170511119 to 170512123 1004 CpG island CpG island 12807
Tssr21930 2 170511418 to 170511451 33 + TSS region transcription start site region 21930
Tssr21931 2 170526733 to 170526774 41 + TSS region transcription start site region 21931
Tssr21932 2 170527600 to 170527619 19 + TSS region transcription start site region 21932
Cpgi12808 2 170528178 to 170528400 222 CpG island CpG island 12808
Gm40001 2 170557658 to 170564865 7207 + lncRNA gene predicted gene, 40001
Gm14637 2 170576054 to 170578424 2370 + antisense lncRNA gene predicted gene 14637
4930470P17Rik 2 170579418 to 170602017 22599 - protein coding gene RIKEN cDNA 4930470P17 gene
Tssr27932 2 170591650 to 170591655 5 - TSS region transcription start site region 27932
Gm40002 2 170638674 to 170653594 14920 + lncRNA gene predicted gene, 40002
Gm14264 2 170652434 to 170662465 10031 - lincRNA gene predicted gene 14264
Gm40003 2 170671103 to 170673838 2735 - lncRNA gene predicted gene, 40003
Tssr27933 2 170673800 to 170673814 14 - TSS region transcription start site region 27933
Cpgi12809 2 170695404 to 170695794 390 CpG island CpG island 12809
Gm34981 2 170712805 to 170725924 13119 + lncRNA gene predicted gene, 34981
Cpgi12810 2 170731620 to 170732502 882 CpG island CpG island 12810
Dok5 2 170731807 to 170879769 147962 + protein coding gene docking protein 5
Tssr21933 2 170731877 to 170731920 43 + TSS region transcription start site region 21933
Tssr21934 2 170731927 to 170731951 24 + TSS region transcription start site region 21934
Tssr21935 2 170731969 to 170731988 19 + TSS region transcription start site region 21935
D2Mit344 2 170758000 to 170758207 207 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 344
Cpgi12811 2 170761099 to 170761493 394 CpG island CpG island 12811
Gm35033 2 170774155 to 170776838 2683 - lncRNA gene predicted gene, 35033
Tssr27934 2 170775720 to 170775739 19 - TSS region transcription start site region 27934
Cpgi12812 2 170788453 to 170788653 200 CpG island CpG island 12812
D2Jcs38 2 170941784 to 170942087 303 DNA segment DNA segment, Chr 2, John C. Schimenti 38
Gm14263 2 170954079 to 170954824 745 - pseudogene predicted gene 14263