Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:170375711-170565720

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bcas1 2 170346991 to 170427845 80854 - protein coding gene breast carcinoma amplified sequence 1
Bcas1os2 2 170356361 to 170380435 24074 + antisense lncRNA gene breast carcinoma amplified sequence 1, opposite strand 2
Tssr27922 2 170387940 to 170387969 29 - TSS region transcription start site region 27922
Tssr27923 2 170387971 to 170388017 46 - TSS region transcription start site region 27923
Bcas1os1 2 170405181 to 170407175 1994 + antisense lncRNA gene breast carcinoma amplified sequence 1, opposite strand 1
Tssr27924 2 170406501 to 170406518 17 - TSS region transcription start site region 27924
Tssr27925 2 170427837 to 170427852 15 - TSS region transcription start site region 27925
Tssr27926 2 170427853 to 170427862 9 - TSS region transcription start site region 27926
Gm14269 2 170463514 to 170463819 305 - pseudogene predicted gene 14269
Tssr27927 2 170463879 to 170463896 17 - TSS region transcription start site region 27927
Gm34608 2 170465102 to 170470003 4901 - lncRNA gene predicted gene, 34608
Tssr27928 2 170470011 to 170470012 1 - TSS region transcription start site region 27928
Tssr27929 2 170470699 to 170470709 10 - TSS region transcription start site region 27929
Tssr27930 2 170470711 to 170470720 9 - TSS region transcription start site region 27930
Tssr21929 2 170470847 to 170470854 7 + TSS region transcription start site region 21929
Gm40000 2 170481602 to 170482474 872 + lncRNA gene predicted gene, 40000
Cyp24a1 2 170482957 to 170497145 14188 - protein coding gene cytochrome P450, family 24, subfamily a, polypeptide 1
Cpgi12805 2 170495410 to 170495570 160 CpG island CpG island 12805
Cpgi12806 2 170496050 to 170497665 1615 CpG island CpG island 12806
Pfdn4 2 170496428 to 170519070 22642 + protein coding gene prefoldin 4
Tssr27931 2 170497141 to 170497147 6 - TSS region transcription start site region 27931
Gm16796 2 170499357 to 170511927 12570 - antisense lncRNA gene predicted gene, 16796
Cpgi12807 2 170511119 to 170512123 1004 CpG island CpG island 12807
Tssr21930 2 170511418 to 170511451 33 + TSS region transcription start site region 21930
Tssr21931 2 170526733 to 170526774 41 + TSS region transcription start site region 21931
Tssr21932 2 170527600 to 170527619 19 + TSS region transcription start site region 21932
Cpgi12808 2 170528178 to 170528400 222 CpG island CpG island 12808
Gm40001 2 170557658 to 170564865 7207 + lncRNA gene predicted gene, 40001