Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:170312106-170402120

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr21924 2 170316478 to 170316486 8 + TSS region transcription start site region 21924
Tssr21925 2 170316549 to 170316560 11 + TSS region transcription start site region 21925
Gm34542 2 170317716 to 170323401 5685 + lncRNA gene predicted gene, 34542
9430096G21Rik 2 170318641 to 170319231 590 unclassified gene RIKEN cDNA 9430096G21 gene
Cpgi12802 2 170319150 to 170319496 346 CpG island CpG island 12802
Cpgi12803 2 170324094 to 170324353 259 CpG island CpG island 12803
Gm39999 2 170328500 to 170337583 9083 - lncRNA gene predicted gene, 39999
Tssr21926 2 170336704 to 170336741 37 + TSS region transcription start site region 21926
Bcas1 2 170346991 to 170427845 80854 - protein coding gene breast carcinoma amplified sequence 1
Tssr27919 2 170349241 to 170349243 2 - TSS region transcription start site region 27919
Tssr21927 2 170349293 to 170349331 38 + TSS region transcription start site region 21927
Cpgi12804 2 170356205 to 170356395 190 CpG island CpG island 12804
Bcas1os2 2 170356361 to 170380435 24074 + antisense lncRNA gene breast carcinoma amplified sequence 1, opposite strand 2
Tssr27920 2 170357106 to 170357120 14 - TSS region transcription start site region 27920
Tssr27921 2 170357122 to 170357129 7 - TSS region transcription start site region 27921
Tssr21928 2 170375620 to 170375631 11 + TSS region transcription start site region 21928
Tssr27922 2 170387940 to 170387969 29 - TSS region transcription start site region 27922
Tssr27923 2 170387971 to 170388017 46 - TSS region transcription start site region 27923