Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:169963542-170303565

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tshz2 2 169633013 to 170071816 438803 + protein coding gene teashirt zinc finger family member 2
Tssr27901 2 169970576 to 169970585 9 - TSS region transcription start site region 27901
Tssr21913 2 169970790 to 169970802 12 + TSS region transcription start site region 21913
Tssr21914 2 169970807 to 169970819 12 + TSS region transcription start site region 21914
A630075F10Rik 2 170061240 to 170070671 9431 - lincRNA gene RIKEN cDNA A630075F10 gene
D2Mit415 2 170092356 to 170092444 88 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 415
Cpgi12796 2 170094330 to 170094830 500 CpG island CpG island 12796
Zfp217 2 170108643 to 170148103 39460 - protein coding gene zinc finger protein 217
Tssr27902 2 170108908 to 170108917 9 - TSS region transcription start site region 27902
D2Mit112 2 170116443 to 170116570 127 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 112
Tssr27903 2 170122077 to 170122084 7 - TSS region transcription start site region 27903
Cpgi12797 2 170130226 to 170131680 1454 CpG island CpG island 12797
Tssr27904 2 170131156 to 170131184 28 - TSS region transcription start site region 27904
Tssr21915 2 170131344 to 170131362 18 + TSS region transcription start site region 21915
Tssr27905 2 170132037 to 170132051 14 - TSS region transcription start site region 27905
Tssr21916 2 170132379 to 170132386 7 + TSS region transcription start site region 21916
Cpgi12798 2 170133353 to 170133857 504 CpG island CpG island 12798
Tssr27906 2 170133542 to 170133565 23 - TSS region transcription start site region 27906
Tssr21917 2 170133659 to 170133679 20 + TSS region transcription start site region 21917
Tssr27907 2 170134527 to 170134556 29 - TSS region transcription start site region 27907
Tssr27908 2 170134572 to 170134583 11 - TSS region transcription start site region 27908
Tssr27909 2 170141607 to 170141611 4 - TSS region transcription start site region 27909
Tssr27910 2 170142673 to 170142678 5 - TSS region transcription start site region 27910
Tssr27911 2 170151666 to 170151685 19 - TSS region transcription start site region 27911
Tssr27912 2 170151686 to 170151700 14 - TSS region transcription start site region 27912
Cpgi12799 2 170153481 to 170153921 440 CpG island CpG island 12799
Tssr27913 2 170155101 to 170155107 6 - TSS region transcription start site region 27913
Tssr21918 2 170155124 to 170155129 5 + TSS region transcription start site region 21918
Tssr27914 2 170158420 to 170158442 22 - TSS region transcription start site region 27914
Tssr21919 2 170176032 to 170176069 37 + TSS region transcription start site region 21919
Gm34403 2 170177103 to 170186188 9085 - lncRNA gene predicted gene, 34403
Cpgi12800 2 170184372 to 170184739 367 CpG island CpG island 12800
Tssr21920 2 170184845 to 170184856 11 + TSS region transcription start site region 21920
Gm17619 2 170192449 to 170194053 1604 - lincRNA gene predicted gene, 17619
Tssr27915 2 170193453 to 170193464 11 - TSS region transcription start site region 27915
Tssr27916 2 170194033 to 170194064 31 - TSS region transcription start site region 27916
Tssr27917 2 170195850 to 170195873 23 - TSS region transcription start site region 27917
Tssr21921 2 170201977 to 170201999 22 + TSS region transcription start site region 21921
Tssr27918 2 170252793 to 170252807 14 - TSS region transcription start site region 27918
Tssr21922 2 170284960 to 170284980 20 + TSS region transcription start site region 21922
Gm14270 2 170285035 to 170285880 845 + pseudogene predicted gene 14270
Tssr21923 2 170285328 to 170285346 18 + TSS region transcription start site region 21923
Cpgi12801 2 170287386 to 170287614 228 CpG island CpG island 12801