Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:168228622-168572893

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20716 2 168180986 to 168230364 49378 - protein coding gene predicted gene 20716
Dpm1 2 168209048 to 168230379 21331 - protein coding gene dolichol-phosphate (beta-D) mannosyltransferase 1
Cpgi12766 2 168229674 to 168231970 2296 CpG island CpG island 12766
Tssr27837 2 168230069 to 168230113 44 - TSS region transcription start site region 27837
Tssr27838 2 168230323 to 168230334 11 - TSS region transcription start site region 27838
Tssr27839 2 168230353 to 168230386 33 - TSS region transcription start site region 27839
Tssr27840 2 168230575 to 168230604 29 - TSS region transcription start site region 27840
Tssr21869 2 168230597 to 168230639 42 + TSS region transcription start site region 21869
Mocs3 2 168230622 to 168232303 1681 + protein coding gene molybdenum cofactor synthesis 3
Tssr27841 2 168231089 to 168231105 16 - TSS region transcription start site region 27841
Tssr27842 2 168231121 to 168231132 11 - TSS region transcription start site region 27842
Tssr21870 2 168231195 to 168231217 22 + TSS region transcription start site region 21870
Tssr21871 2 168231220 to 168231225 5 + TSS region transcription start site region 21871
Tssr21872 2 168231229 to 168231239 10 + TSS region transcription start site region 21872
Tssr21873 2 168231261 to 168231267 6 + TSS region transcription start site region 21873
Gm14237 2 168242001 to 168242430 429 - pseudogene predicted gene 14237
Kcng1 2 168260117 to 168281736 21619 - protein coding gene potassium voltage-gated channel, subfamily G, member 1
Cpgi12767 2 168262585 to 168263215 630 CpG island CpG island 12767
Tssr27843 2 168262832 to 168262866 34 - TSS region transcription start site region 27843
Cpgi12768 2 168268372 to 168269220 848 CpG island CpG island 12768
Cpgi12769 2 168280437 to 168281750 1313 CpG island CpG island 12769
Tssr27844 2 168281096 to 168281118 22 - TSS region transcription start site region 27844
Tssr27845 2 168281120 to 168281144 24 - TSS region transcription start site region 27845
Gm14262 2 168289019 to 168295121 6102 - lincRNA gene predicted gene 14262
Cpgi12770 2 168333733 to 168333963 230 CpG island CpG island 12770
Gm22704 2 168335700 to 168335836 136 + snoRNA gene predicted gene, 22704
Cpgi12771 2 168393444 to 168393687 243 CpG island CpG island 12771
Gm39992 2 168398622 to 168402893 4271 - lncRNA gene predicted gene, 39992
Gm33262 2 168403903 to 168404898 995 + lncRNA gene predicted gene, 33262
Gm33359 2 168407676 to 168424136 16460 + lncRNA gene predicted gene, 33359
Cpgi12772 2 168415212 to 168415418 206 CpG island CpG island 12772
Gm14234 2 168417739 to 168418574 835 - pseudogene predicted gene 14234
Gm33413 2 168439519 to 168442405 2886 + lncRNA gene predicted gene, 33413
Nfatc2 2 168476410 to 168601657 125247 - protein coding gene nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2
Cpgi12773 2 168479939 to 168480230 291 CpG island CpG island 12773
Tssr27846 2 168508172 to 168508221 49 - TSS region transcription start site region 27846
Tssr27847 2 168513184 to 168513200 16 - TSS region transcription start site region 27847
Tssr27848 2 168515261 to 168515273 12 - TSS region transcription start site region 27848
Tssr21874 2 168532356 to 168532372 16 + TSS region transcription start site region 21874
D2Mit414 2 168536699 to 168536807 108 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 414
Tssr21875 2 168549048 to 168549059 11 + TSS region transcription start site region 21875
Cpgi12774 2 168570760 to 168571598 838 CpG island CpG island 12774
Tssr27849 2 168571197 to 168571218 21 - TSS region transcription start site region 27849
Tssr27850 2 168571423 to 168571449 26 - TSS region transcription start site region 27850