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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:167946004-168236203

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ptpn1 2 167932057 to 167979385 47328 + protein coding gene protein tyrosine phosphatase, non-receptor type 1
Ripor3 2 167980164 to 168010618 30454 - protein coding gene RIPOR family member 3
Tssr27813 2 167988267 to 167988291 24 - TSS region transcription start site region 27813
Tssr27814 2 167997664 to 167997697 33 - TSS region transcription start site region 27814
Tssr27815 2 168003492 to 168003503 11 - TSS region transcription start site region 27815
Tssr27816 2 168003559 to 168003566 7 - TSS region transcription start site region 27816
Gm14236 2 168010529 to 168011506 977 + antisense lncRNA gene predicted gene 14236
Tssr27817 2 168010655 to 168010663 8 - TSS region transcription start site region 27817
Tssr27818 2 168010702 to 168010713 11 - TSS region transcription start site region 27818
D2Mit291.1 2 168032273 to 168032444 171 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 291.1
Tssr27819 2 168039410 to 168039415 5 - TSS region transcription start site region 27819
D2Dcr130 2 168047779 to 168047876 97 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 130
Tssr27820 2 168050076 to 168050081 5 - TSS region transcription start site region 27820
Cpgi12760 2 168050116 to 168050910 794 CpG island CpG island 12760
Tssr27821 2 168050352 to 168050364 12 - TSS region transcription start site region 27821
Tssr27822 2 168050389 to 168050400 11 - TSS region transcription start site region 27822
Tssr27823 2 168050408 to 168050428 20 - TSS region transcription start site region 27823
Tssr27824 2 168051946 to 168051952 6 - TSS region transcription start site region 27824
Gm33108 2 168060648 to 168069443 8795 - lncRNA gene predicted gene, 33108
Gm24327 2 168064820 to 168064897 77 - miRNA gene predicted gene, 24327
Tssr27825 2 168068254 to 168068303 49 - TSS region transcription start site region 27825
Gm39990 2 168078412 to 168080726 2314 - lncRNA gene predicted gene, 39990
Tssr21860 2 168078748 to 168078760 12 + TSS region transcription start site region 21860
Cpgi12761 2 168079969 to 168082066 2097 CpG island CpG island 12761
Tssr21861 2 168080882 to 168080910 28 + TSS region transcription start site region 21861
Pard6b 2 168081004 to 168101203 20199 + protein coding gene par-6 family cell polarity regulator beta
Tssr21862 2 168081024 to 168081035 11 + TSS region transcription start site region 21862
Tssr21863 2 168081103 to 168081122 19 + TSS region transcription start site region 21863
Tssr21864 2 168081139 to 168081155 16 + TSS region transcription start site region 21864
Tssr21865 2 168081281 to 168081301 20 + TSS region transcription start site region 21865
D2Mit111 2 168087806 to 168087954 148 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 111
Cpgi12762 2 168106667 to 168107367 700 CpG island CpG island 12762
Cpgi12763 2 168117123 to 168117954 831 CpG island CpG island 12763
Tssr27826 2 168119170 to 168119193 23 - TSS region transcription start site region 27826
Tssr21866 2 168125710 to 168125716 6 + TSS region transcription start site region 21866
Gm46787 2 168144596 to 168146001 1405 + lncRNA gene predicted gene, 46787
Gm39991 2 168147417 to 168149134 1717 + lncRNA gene predicted gene, 39991
Gm14235 2 168148017 to 168153533 5516 - lincRNA gene predicted gene 14235
Cpgi12764 2 168148437 to 168148800 363 CpG island CpG island 12764
E130018N17Rik 2 168152603 to 168154513 1910 - lincRNA gene RIKEN cDNA E130018N17 gene
Tssr21867 2 168159066 to 168159077 11 + TSS region transcription start site region 21867
Tssr21868 2 168159079 to 168159088 9 + TSS region transcription start site region 21868
Gm33185 2 168161211 to 168162323 1112 + lncRNA gene predicted gene, 33185
Gm24561 2 168178158 to 168178252 94 - miRNA gene predicted gene, 24561
Gm20716 2 168180986 to 168230364 49378 - protein coding gene predicted gene 20716
Adnp 2 168180986 to 168207112 26126 - protein coding gene activity-dependent neuroprotective protein
Tssr27827 2 168184105 to 168184128 23 - TSS region transcription start site region 27827
Tssr27828 2 168186097 to 168186101 4 - TSS region transcription start site region 27828
D2Ertd93e 2 168202269 to 168202490 221 DNA segment DNA segment, Chr 2, ERATO Doi 93, expressed
Tssr27829 2 168204676 to 168204690 14 - TSS region transcription start site region 27829
Cpgi12765 2 168206143 to 168207722 1579 CpG island CpG island 12765
Tssr27830 2 168206754 to 168206759 5 - TSS region transcription start site region 27830
Tssr27831 2 168206800 to 168206809 9 - TSS region transcription start site region 27831
Tssr27832 2 168206875 to 168206888 13 - TSS region transcription start site region 27832
Tssr27833 2 168207005 to 168207014 9 - TSS region transcription start site region 27833
Tssr27834 2 168207016 to 168207025 9 - TSS region transcription start site region 27834
Tssr27835 2 168207063 to 168207142 79 - TSS region transcription start site region 27835
Tssr27836 2 168207263 to 168207302 39 - TSS region transcription start site region 27836
Dpm1 2 168209048 to 168230379 21331 - protein coding gene dolichol-phosphate (beta-D) mannosyltransferase 1
D2Ertd63e 2 168210955 to 168211177 222 DNA segment DNA segment, Chr 2, ERATO Doi 63, expressed
Cpgi12766 2 168229674 to 168231970 2296 CpG island CpG island 12766
Tssr27837 2 168230069 to 168230113 44 - TSS region transcription start site region 27837
Tssr27838 2 168230323 to 168230334 11 - TSS region transcription start site region 27838
Tssr27839 2 168230353 to 168230386 33 - TSS region transcription start site region 27839
Tssr27840 2 168230575 to 168230604 29 - TSS region transcription start site region 27840
Tssr21869 2 168230597 to 168230639 42 + TSS region transcription start site region 21869
Mocs3 2 168230622 to 168232303 1681 + protein coding gene molybdenum cofactor synthesis 3
Tssr27841 2 168231089 to 168231105 16 - TSS region transcription start site region 27841
Tssr27842 2 168231121 to 168231132 11 - TSS region transcription start site region 27842
Tssr21870 2 168231195 to 168231217 22 + TSS region transcription start site region 21870
Tssr21871 2 168231220 to 168231225 5 + TSS region transcription start site region 21871
Tssr21872 2 168231229 to 168231239 10 + TSS region transcription start site region 21872
Tssr21873 2 168231261 to 168231267 6 + TSS region transcription start site region 21873