Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:167779987-168010562

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm14321 2 167777467 to 167782569 5102 + lincRNA gene predicted gene 14321
9230111E07Rik 2 167782053 to 167783486 1433 + lincRNA gene RIKEN cDNA 9230111E07 gene
Gm32513 2 167789368 to 167796286 6918 + lncRNA gene predicted gene, 32513
Gm32600 2 167815406 to 167821085 5679 - lncRNA gene predicted gene, 32600
1200007C13Rik 2 167827693 to 167833646 5953 - lincRNA gene RIKEN cDNA 1200007C13 gene
Cpgi12756 2 167831195 to 167831466 271 CpG island CpG island 12756
Tssr27809 2 167833642 to 167833648 6 - TSS region transcription start site region 27809
Gm32685 2 167836113 to 167839152 3039 + lncRNA gene predicted gene, 32685
Gm32747 2 167839218 to 167840015 797 - lncRNA gene predicted gene, 32747
Gm32800 2 167847197 to 167847980 783 - lncRNA gene predicted gene, 32800
Tssr27810 2 167847823 to 167847834 11 - TSS region transcription start site region 27810
Gm32845 2 167848407 to 167858426 10019 + lncRNA gene predicted gene, 32845
Gm33033 2 167858300 to 167860617 2317 - lncRNA gene predicted gene, 33033
Gm14319 2 167858585 to 167862542 3957 + lincRNA gene predicted gene 14319
Tssr27811 2 167861264 to 167861266 2 - TSS region transcription start site region 27811
Tssr21853 2 167863095 to 167863124 29 + TSS region transcription start site region 21853
Gm32928 2 167870960 to 167873118 2158 - lncRNA gene predicted gene, 32928
Tssr21854 2 167871760 to 167871794 34 + TSS region transcription start site region 21854
Tssr27812 2 167877596 to 167877612 16 - TSS region transcription start site region 27812
Cpgi12757 2 167894987 to 167895562 575 CpG island CpG island 12757
Cpgi12758 2 167899898 to 167900052 154 CpG island CpG island 12758
Tssr775 2 167924999 to 167925015 16 - TSS region transcription start site region 775
Cpgi12759 2 167931491 to 167933198 1707 CpG island CpG island 12759
Tssr21855 2 167932023 to 167932064 41 + TSS region transcription start site region 21855
Ptpn1 2 167932057 to 167979385 47328 + protein coding gene protein tyrosine phosphatase, non-receptor type 1
Tssr21856 2 167932336 to 167932379 43 + TSS region transcription start site region 21856
Tssr21857 2 167932383 to 167932400 17 + TSS region transcription start site region 21857
Tssr21858 2 167936474 to 167936483 9 + TSS region transcription start site region 21858
Tssr21859 2 167940798 to 167940802 4 + TSS region transcription start site region 21859
Ripor3 2 167980164 to 168010618 30454 - protein coding gene RIPOR family member 3
Tssr27813 2 167988267 to 167988291 24 - TSS region transcription start site region 27813
Tssr27814 2 167997664 to 167997697 33 - TSS region transcription start site region 27814
Tssr27815 2 168003492 to 168003503 11 - TSS region transcription start site region 27815
Tssr27816 2 168003559 to 168003566 7 - TSS region transcription start site region 27816
Gm14236 2 168010529 to 168011506 977 + antisense lncRNA gene predicted gene 14236