Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:167777383-168087400

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm32287 2 167769108 to 167777716 8608 - lncRNA gene predicted gene, 32287
Cpgi12755 2 167777433 to 167778002 569 CpG island CpG island 12755
Gm14321 2 167777467 to 167782569 5102 + lincRNA gene predicted gene 14321
Tssr21850 2 167777475 to 167777513 38 + TSS region transcription start site region 21850
Tssr27807 2 167777898 to 167777910 12 - TSS region transcription start site region 27807
Tssr27808 2 167777920 to 167777934 14 - TSS region transcription start site region 27808
Tssr774 2 167777996 to 167778007 11 - TSS region transcription start site region 774
Tssr21851 2 167778092 to 167778106 14 + TSS region transcription start site region 21851
Tssr21852 2 167778157 to 167778169 12 + TSS region transcription start site region 21852
9230111E07Rik 2 167782053 to 167783486 1433 + lincRNA gene RIKEN cDNA 9230111E07 gene
Gm32513 2 167789368 to 167796286 6918 + lncRNA gene predicted gene, 32513
Gm32600 2 167815406 to 167821085 5679 - lncRNA gene predicted gene, 32600
1200007C13Rik 2 167827693 to 167833646 5953 - lincRNA gene RIKEN cDNA 1200007C13 gene
Cpgi12756 2 167831195 to 167831466 271 CpG island CpG island 12756
Tssr27809 2 167833642 to 167833648 6 - TSS region transcription start site region 27809
Gm32685 2 167836113 to 167839152 3039 + lncRNA gene predicted gene, 32685
Gm32747 2 167839218 to 167840015 797 - lncRNA gene predicted gene, 32747
Gm32800 2 167847197 to 167847980 783 - lncRNA gene predicted gene, 32800
Tssr27810 2 167847823 to 167847834 11 - TSS region transcription start site region 27810
Gm32845 2 167848407 to 167858426 10019 + lncRNA gene predicted gene, 32845
Gm33033 2 167858300 to 167860617 2317 - lncRNA gene predicted gene, 33033
Gm14319 2 167858585 to 167862542 3957 + lincRNA gene predicted gene 14319
Tssr27811 2 167861264 to 167861266 2 - TSS region transcription start site region 27811
Tssr21853 2 167863095 to 167863124 29 + TSS region transcription start site region 21853
Gm32928 2 167870960 to 167873118 2158 - lncRNA gene predicted gene, 32928
Tssr21854 2 167871760 to 167871794 34 + TSS region transcription start site region 21854
Tssr27812 2 167877596 to 167877612 16 - TSS region transcription start site region 27812
Cpgi12757 2 167894987 to 167895562 575 CpG island CpG island 12757
Cpgi12758 2 167899898 to 167900052 154 CpG island CpG island 12758
Tssr775 2 167924999 to 167925015 16 - TSS region transcription start site region 775
Cpgi12759 2 167931491 to 167933198 1707 CpG island CpG island 12759
Tssr21855 2 167932023 to 167932064 41 + TSS region transcription start site region 21855
Ptpn1 2 167932057 to 167979385 47328 + protein coding gene protein tyrosine phosphatase, non-receptor type 1
Tssr21856 2 167932336 to 167932379 43 + TSS region transcription start site region 21856
Tssr21857 2 167932383 to 167932400 17 + TSS region transcription start site region 21857
Tssr21858 2 167936474 to 167936483 9 + TSS region transcription start site region 21858
Tssr21859 2 167940798 to 167940802 4 + TSS region transcription start site region 21859
Ripor3 2 167980164 to 168010618 30454 - protein coding gene RIPOR family member 3
Tssr27813 2 167988267 to 167988291 24 - TSS region transcription start site region 27813
Tssr27814 2 167997664 to 167997697 33 - TSS region transcription start site region 27814
Tssr27815 2 168003492 to 168003503 11 - TSS region transcription start site region 27815
Tssr27816 2 168003559 to 168003566 7 - TSS region transcription start site region 27816
Gm14236 2 168010529 to 168011506 977 + antisense lncRNA gene predicted gene 14236
Tssr27817 2 168010655 to 168010663 8 - TSS region transcription start site region 27817
Tssr27818 2 168010702 to 168010713 11 - TSS region transcription start site region 27818
D2Mit291.1 2 168032273 to 168032444 171 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 291.1
Tssr27819 2 168039410 to 168039415 5 - TSS region transcription start site region 27819
D2Dcr130 2 168047779 to 168047876 97 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 130
Tssr27820 2 168050076 to 168050081 5 - TSS region transcription start site region 27820
Cpgi12760 2 168050116 to 168050910 794 CpG island CpG island 12760
Tssr27821 2 168050352 to 168050364 12 - TSS region transcription start site region 27821
Tssr27822 2 168050389 to 168050400 11 - TSS region transcription start site region 27822
Tssr27823 2 168050408 to 168050428 20 - TSS region transcription start site region 27823
Tssr27824 2 168051946 to 168051952 6 - TSS region transcription start site region 27824
Gm33108 2 168060648 to 168069443 8795 - lncRNA gene predicted gene, 33108
Gm24327 2 168064820 to 168064897 77 - miRNA gene predicted gene, 24327
Tssr27825 2 168068254 to 168068303 49 - TSS region transcription start site region 27825
Gm39990 2 168078412 to 168080726 2314 - lncRNA gene predicted gene, 39990
Tssr21860 2 168078748 to 168078760 12 + TSS region transcription start site region 21860
Cpgi12761 2 168079969 to 168082066 2097 CpG island CpG island 12761
Tssr21861 2 168080882 to 168080910 28 + TSS region transcription start site region 21861
Pard6b 2 168081004 to 168101203 20199 + protein coding gene par-6 family cell polarity regulator beta
Tssr21862 2 168081024 to 168081035 11 + TSS region transcription start site region 21862
Tssr21863 2 168081103 to 168081122 19 + TSS region transcription start site region 21863
Tssr21864 2 168081139 to 168081155 16 + TSS region transcription start site region 21864
Tssr21865 2 168081281 to 168081301 20 + TSS region transcription start site region 21865