Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:167654243-167854260

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20431 2 167607850 to 167661496 53646 - protein coding gene predicted gene 20431
Tmem189 2 167643225 to 167661544 18319 - protein coding gene transmembrane protein 189
Tssr27788 2 167654913 to 167654963 50 - TSS region transcription start site region 27788
Tssr21827 2 167656786 to 167656795 9 + TSS region transcription start site region 21827
Cpgi12752 2 167660832 to 167662206 1374 CpG island CpG island 12752
Tssr27789 2 167661514 to 167661591 77 - TSS region transcription start site region 27789
Tssr21828 2 167661753 to 167661767 14 + TSS region transcription start site region 21828
Gm14320 2 167664565 to 167667704 3139 + antisense lncRNA gene predicted gene 14320
Cpgi12753 2 167680016 to 167680283 267 CpG island CpG island 12753
Cpgi12754 2 167688088 to 167690234 2146 CpG island CpG island 12754
Tssr21829 2 167688728 to 167688765 37 + TSS region transcription start site region 21829
Tssr21830 2 167688766 to 167688793 27 + TSS region transcription start site region 21830
Cebpb 2 167688915 to 167690418 1503 + protein coding gene CCAAT/enhancer binding protein (C/EBP), beta
Tssr21831 2 167688956 to 167688973 17 + TSS region transcription start site region 21831
Tssr27790 2 167689211 to 167689239 28 - TSS region transcription start site region 27790
Tssr21832 2 167690273 to 167690296 23 + TSS region transcription start site region 21832
Tssr21833 2 167690717 to 167690737 20 + TSS region transcription start site region 21833
Tssr21834 2 167690749 to 167690769 20 + TSS region transcription start site region 21834
A530013C23Rik 2 167690759 to 167697413 6654 + lincRNA gene RIKEN cDNA A530013C23 gene
Tssr21835 2 167693454 to 167693461 7 + TSS region transcription start site region 21835
Tssr27791 2 167698013 to 167698034 21 - TSS region transcription start site region 27791
Tssr21836 2 167698127 to 167698153 26 + TSS region transcription start site region 21836
Tssr21837 2 167698162 to 167698199 37 + TSS region transcription start site region 21837
Tssr21838 2 167721702 to 167721726 24 + TSS region transcription start site region 21838
Tssr21839 2 167721731 to 167721756 25 + TSS region transcription start site region 21839
Gm38464 2 167725231 to 167734667 9436 + lncRNA gene predicted gene, 38464
Tssr21840 2 167742765 to 167742785 20 + TSS region transcription start site region 21840
Tssr27792 2 167743866 to 167743935 69 - TSS region transcription start site region 27792
Tssr27793 2 167744092 to 167744107 15 - TSS region transcription start site region 27793
Tssr27794 2 167744117 to 167744127 10 - TSS region transcription start site region 27794
Tssr27795 2 167744158 to 167744169 11 - TSS region transcription start site region 27795
Tssr21841 2 167744287 to 167744312 25 + TSS region transcription start site region 21841
Tssr21842 2 167750269 to 167750280 11 + TSS region transcription start site region 21842
Tssr21843 2 167753036 to 167753048 12 + TSS region transcription start site region 21843
Tssr27796 2 167753296 to 167753345 49 - TSS region transcription start site region 27796
Tssr27797 2 167753913 to 167753938 25 - TSS region transcription start site region 27797
Tssr21844 2 167754243 to 167754260 17 + TSS region transcription start site region 21844
Tssr21845 2 167760218 to 167760250 32 + TSS region transcription start site region 21845
Tssr21846 2 167760348 to 167760352 4 + TSS region transcription start site region 21846
Tssr27798 2 167765287 to 167765301 14 - TSS region transcription start site region 27798
Gm32287 2 167769108 to 167777716 8608 - lncRNA gene predicted gene, 32287
Tssr27799 2 167770444 to 167770476 32 - TSS region transcription start site region 27799
Tssr27800 2 167773043 to 167773052 9 - TSS region transcription start site region 27800
Tssr770 2 167773127 to 167773134 7 + TSS region transcription start site region 770
Tssr21847 2 167773151 to 167773159 8 + TSS region transcription start site region 21847
Tssr21848 2 167773180 to 167773192 12 + TSS region transcription start site region 21848
Tssr27801 2 167774950 to 167774969 19 - TSS region transcription start site region 27801
Tssr771 2 167775155 to 167775163 8 - TSS region transcription start site region 771
Tssr27802 2 167775180 to 167775187 7 - TSS region transcription start site region 27802
Tssr27803 2 167775204 to 167775216 12 - TSS region transcription start site region 27803
Tssr27804 2 167775390 to 167775401 11 - TSS region transcription start site region 27804
Tssr27805 2 167775467 to 167775479 12 - TSS region transcription start site region 27805
Tssr21849 2 167775529 to 167775553 24 + TSS region transcription start site region 21849
Tssr772 2 167775670 to 167775695 25 + TSS region transcription start site region 772
Tssr773 2 167776755 to 167776765 10 + TSS region transcription start site region 773
Tssr27806 2 167777269 to 167777282 13 - TSS region transcription start site region 27806
Cpgi12755 2 167777433 to 167778002 569 CpG island CpG island 12755
Gm14321 2 167777467 to 167782569 5102 + lincRNA gene predicted gene 14321
Tssr21850 2 167777475 to 167777513 38 + TSS region transcription start site region 21850
Tssr27807 2 167777898 to 167777910 12 - TSS region transcription start site region 27807
Tssr27808 2 167777920 to 167777934 14 - TSS region transcription start site region 27808
Tssr774 2 167777996 to 167778007 11 - TSS region transcription start site region 774
Tssr21851 2 167778092 to 167778106 14 + TSS region transcription start site region 21851
Tssr21852 2 167778157 to 167778169 12 + TSS region transcription start site region 21852
9230111E07Rik 2 167782053 to 167783486 1433 + lincRNA gene RIKEN cDNA 9230111E07 gene
Gm32513 2 167789368 to 167796286 6918 + lncRNA gene predicted gene, 32513
Gm32600 2 167815406 to 167821085 5679 - lncRNA gene predicted gene, 32600
1200007C13Rik 2 167827693 to 167833646 5953 - lincRNA gene RIKEN cDNA 1200007C13 gene
Cpgi12756 2 167831195 to 167831466 271 CpG island CpG island 12756
Tssr27809 2 167833642 to 167833648 6 - TSS region transcription start site region 27809
Gm32685 2 167836113 to 167839152 3039 + lncRNA gene predicted gene, 32685
Gm32747 2 167839218 to 167840015 797 - lncRNA gene predicted gene, 32747
Gm32800 2 167847197 to 167847980 783 - lncRNA gene predicted gene, 32800
Tssr27810 2 167847823 to 167847834 11 - TSS region transcription start site region 27810
Gm32845 2 167848407 to 167858426 10019 + lncRNA gene predicted gene, 32845