Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:167488195-167592814

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spata2 2 167481136 to 167492874 11738 - protein coding gene spermatogenesis associated 2
Cpgi12744 2 167491907 to 167493403 1496 CpG island CpG island 12744
Rnf114 2 167492645 to 167516169 23524 + protein coding gene ring finger protein 114
Tssr27777 2 167492826 to 167492891 65 - TSS region transcription start site region 27777
Cpgi12745 2 167502973 to 167504540 1567 CpG island CpG island 12745
Tssr21812 2 167503207 to 167503224 17 + TSS region transcription start site region 21812
Tssr21813 2 167503229 to 167503238 9 + TSS region transcription start site region 21813
Tssr21814 2 167503414 to 167503461 47 + TSS region transcription start site region 21814
Tssr21815 2 167504127 to 167504139 12 + TSS region transcription start site region 21815
Tssr21816 2 167504141 to 167504150 9 + TSS region transcription start site region 21816
Tssr21817 2 167504157 to 167504168 11 + TSS region transcription start site region 21817
Tssr21818 2 167504198 to 167504214 16 + TSS region transcription start site region 21818
Gm11474 2 167535166 to 167535442 276 - pseudogene predicted gene 11474
Cpgi12746 2 167537743 to 167539246 1503 CpG island CpG island 12746
Tssr21819 2 167538192 to 167538210 18 + TSS region transcription start site region 21819
Snai1 2 167538195 to 167542814 4619 + protein coding gene snail family zinc finger 1
Tssr21820 2 167539782 to 167539787 5 + TSS region transcription start site region 21820
Tssr27778 2 167543628 to 167543634 6 - TSS region transcription start site region 27778
Gm11476 2 167553314 to 167607845 54531 + lncRNA gene predicted gene 11476
Cpgi12747 2 167559410 to 167559732 322 CpG island CpG island 12747
Cpgi12748 2 167565786 to 167565955 169 CpG island CpG island 12748
Gm31619 2 167571285 to 167589803 18518 - lncRNA gene predicted gene, 31619
Tssr27779 2 167577178 to 167577182 4 - TSS region transcription start site region 27779
Cpgi12749 2 167588984 to 167589184 200 CpG island CpG island 12749
Tssr769 2 167588990 to 167589001 11 + TSS region transcription start site region 769
Tssr21821 2 167589081 to 167589102 21 + TSS region transcription start site region 21821
Tssr27780 2 167589403 to 167589457 54 - TSS region transcription start site region 27780
Tssr21822 2 167589548 to 167589559 11 + TSS region transcription start site region 21822
Tssr21823 2 167589592 to 167589616 24 + TSS region transcription start site region 21823
Tssr27781 2 167590517 to 167590527 10 - TSS region transcription start site region 27781
Tssr21824 2 167590738 to 167590750 12 + TSS region transcription start site region 21824
Gm11475 2 167591395 to 167591870 475 + pseudogene predicted gene 11475