Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:167346907-167638403

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ltpr2 2 103265371 to 167370436 64105065 QTL Leishmania tropica response 2
B4galt5 2 167298444 to 167349178 50734 - protein coding gene UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5
Cpgi12738 2 167348358 to 167349943 1585 CpG island CpG island 12738
Tssr27767 2 167349111 to 167349122 11 - TSS region transcription start site region 27767
Tssr27768 2 167349142 to 167349157 15 - TSS region transcription start site region 27768
Tssr767 2 167349158 to 167349163 5 - TSS region transcription start site region 767
Tssr27769 2 167349167 to 167349249 82 - TSS region transcription start site region 27769
Tssr27770 2 167349343 to 167349371 28 - TSS region transcription start site region 27770
Tssr21794 2 167349674 to 167349715 41 + TSS region transcription start site region 21794
Tssr21795 2 167349720 to 167349735 15 + TSS region transcription start site region 21795
Tssr27771 2 167358382 to 167358395 13 - TSS region transcription start site region 27771
Tssr21796 2 167358882 to 167358909 27 + TSS region transcription start site region 21796
Tssr21797 2 167358917 to 167358945 28 + TSS region transcription start site region 21797
Tssr21798 2 167358970 to 167358983 13 + TSS region transcription start site region 21798
Tssr21799 2 167363584 to 167363588 4 + TSS region transcription start site region 21799
Tssr21800 2 167363612 to 167363652 40 + TSS region transcription start site region 21800
Tssr27772 2 167367261 to 167367265 4 - TSS region transcription start site region 27772
Lmr16 2 167370301 to 167370436 135 QTL leishmaniasis resistance 16
D2Mit52 2 167370301 to 167370436 135 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 52
Ltpr2e 2 167370301 to 167370436 135 QTL Leishmania tropica response 2e
Lrnx10 2 167370301 to 167370436 135 QTL learning-contextual 10
Tssr21801 2 167375341 to 167375354 13 + TSS region transcription start site region 21801
Tssr21802 2 167375355 to 167375363 8 + TSS region transcription start site region 21802
Tssr21803 2 167381852 to 167381898 46 + TSS region transcription start site region 21803
Tssr768 2 167382003 to 167382004 1 + TSS region transcription start site region 768
Tssr27773 2 167383559 to 167383572 13 - TSS region transcription start site region 27773
Tssr21804 2 167384062 to 167384073 11 + TSS region transcription start site region 21804
Tssr21805 2 167384084 to 167384096 12 + TSS region transcription start site region 21805
Tssr21806 2 167395998 to 167396003 5 + TSS region transcription start site region 21806
Cpgi12739 2 167421118 to 167422296 1178 CpG island CpG island 12739
Tssr27774 2 167421451 to 167421467 16 - TSS region transcription start site region 27774
Tssr21807 2 167421692 to 167421703 11 + TSS region transcription start site region 21807
Tssr21808 2 167421706 to 167421732 26 + TSS region transcription start site region 21808
Slc9a8 2 167421712 to 167477000 55288 + protein coding gene solute carrier family 9 (sodium/hydrogen exchanger), member 8
Tssr21809 2 167422037 to 167422050 13 + TSS region transcription start site region 21809
Tssr21810 2 167443763 to 167443768 5 + TSS region transcription start site region 21810
Tssr21811 2 167451011 to 167451030 19 + TSS region transcription start site region 21811
Cpgi12740 2 167471365 to 167471615 250 CpG island CpG island 12740
Spata2 2 167481136 to 167492874 11738 - protein coding gene spermatogenesis associated 2
Tssr27775 2 167483319 to 167483347 28 - TSS region transcription start site region 27775
Cpgi12741 2 167483370 to 167483708 338 CpG island CpG island 12741
Cpgi12742 2 167484157 to 167484398 241 CpG island CpG island 12742
Cpgi12743 2 167485262 to 167485443 181 CpG island CpG island 12743
Tssr27776 2 167485649 to 167485658 9 - TSS region transcription start site region 27776
Cpgi12744 2 167491907 to 167493403 1496 CpG island CpG island 12744
Rnf114 2 167492645 to 167516169 23524 + protein coding gene ring finger protein 114
Tssr27777 2 167492826 to 167492891 65 - TSS region transcription start site region 27777
Cpgi12745 2 167502973 to 167504540 1567 CpG island CpG island 12745
Tssr21812 2 167503207 to 167503224 17 + TSS region transcription start site region 21812
Tssr21813 2 167503229 to 167503238 9 + TSS region transcription start site region 21813
Tssr21814 2 167503414 to 167503461 47 + TSS region transcription start site region 21814
Tssr21815 2 167504127 to 167504139 12 + TSS region transcription start site region 21815
Tssr21816 2 167504141 to 167504150 9 + TSS region transcription start site region 21816
Tssr21817 2 167504157 to 167504168 11 + TSS region transcription start site region 21817
Tssr21818 2 167504198 to 167504214 16 + TSS region transcription start site region 21818
Gm11474 2 167535166 to 167535442 276 - pseudogene predicted gene 11474
Cpgi12746 2 167537743 to 167539246 1503 CpG island CpG island 12746
Tssr21819 2 167538192 to 167538210 18 + TSS region transcription start site region 21819
Snai1 2 167538195 to 167542814 4619 + protein coding gene snail family zinc finger 1
Tssr21820 2 167539782 to 167539787 5 + TSS region transcription start site region 21820
Tssr27778 2 167543628 to 167543634 6 - TSS region transcription start site region 27778
Gm11476 2 167553314 to 167607845 54531 + lncRNA gene predicted gene 11476
Cpgi12747 2 167559410 to 167559732 322 CpG island CpG island 12747
Cpgi12748 2 167565786 to 167565955 169 CpG island CpG island 12748
Gm31619 2 167571285 to 167589803 18518 - lncRNA gene predicted gene, 31619
Tssr27779 2 167577178 to 167577182 4 - TSS region transcription start site region 27779
Cpgi12749 2 167588984 to 167589184 200 CpG island CpG island 12749
Tssr769 2 167588990 to 167589001 11 + TSS region transcription start site region 769
Tssr21821 2 167589081 to 167589102 21 + TSS region transcription start site region 21821
Tssr27780 2 167589403 to 167589457 54 - TSS region transcription start site region 27780
Tssr21822 2 167589548 to 167589559 11 + TSS region transcription start site region 21822
Tssr21823 2 167589592 to 167589616 24 + TSS region transcription start site region 21823
Tssr27781 2 167590517 to 167590527 10 - TSS region transcription start site region 27781
Tssr21824 2 167590738 to 167590750 12 + TSS region transcription start site region 21824
Gm11475 2 167591395 to 167591870 475 + pseudogene predicted gene 11475
Cpgi12750 2 167597303 to 167597849 546 CpG island CpG island 12750
D2Dcr129 2 167603743 to 167603838 95 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 129
Ube2v1 2 167607639 to 167632016 24377 - protein coding gene ubiquitin-conjugating enzyme E2 variant 1
Gm20431 2 167607850 to 167661496 53646 - protein coding gene predicted gene 20431
Tssr21825 2 167629085 to 167629098 13 + TSS region transcription start site region 21825
Cpgi12751 2 167631172 to 167632403 1231 CpG island CpG island 12751
Tssr27782 2 167631983 to 167632009 26 - TSS region transcription start site region 27782
Gm31852 2 167632107 to 167642615 10508 + lncRNA gene predicted gene, 31852