Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:167076333-167366385

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39984 2 167074517 to 167079239 4722 - lncRNA gene predicted gene, 39984
Gm11472 2 167087184 to 167087739 555 - pseudogene predicted gene 11472
Tssr27745 2 167087768 to 167087775 7 - TSS region transcription start site region 27745
Gm11471 2 167093559 to 167093756 197 + pseudogene predicted gene 11471
Kcnb1 2 167095969 to 167189988 94019 - protein coding gene potassium voltage gated channel, Shab-related subfamily, member 1
Tssr27746 2 167101576 to 167101578 2 - TSS region transcription start site region 27746
Cpgi12731 2 167102165 to 167103060 895 CpG island CpG island 12731
Cpgi12732 2 167104633 to 167106227 1594 CpG island CpG island 12732
Tssr27747 2 167111689 to 167111694 5 - TSS region transcription start site region 27747
D2Dcr128 2 167114771 to 167114869 98 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 128
Cpgi12733 2 167129318 to 167129470 152 CpG island CpG island 12733
Tssr21791 2 167129481 to 167129493 12 + TSS region transcription start site region 21791
D2Mit413 2 167146982 to 167147098 116 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 413
Bdt1 2 167146982 to 167147098 116 QTL bone density traits 1
Cpgi12734 2 167188036 to 167190886 2850 CpG island CpG island 12734
Tssr27748 2 167188624 to 167188637 13 - TSS region transcription start site region 27748
1110018N20Rik 2 167188702 to 167192808 4106 + unclassified non-coding RNA gene RIKEN cDNA 1110018N20 gene
Tssr27749 2 167188771 to 167188773 2 - TSS region transcription start site region 27749
Tssr27750 2 167188787 to 167188815 28 - TSS region transcription start site region 27750
Tssr27751 2 167188829 to 167188836 7 - TSS region transcription start site region 27751
Tssr21792 2 167189660 to 167189676 16 + TSS region transcription start site region 21792
Tssr21793 2 167189679 to 167189693 14 + TSS region transcription start site region 21793
Tssr27752 2 167190087 to 167190108 21 - TSS region transcription start site region 27752
Tssr27753 2 167190124 to 167190173 49 - TSS region transcription start site region 27753
Tssr27754 2 167190287 to 167190312 25 - TSS region transcription start site region 27754
Gm14291 2 167201576 to 167202799 1223 + antisense lncRNA gene predicted gene 14291
Ptgis 2 167203196 to 167240537 37341 - protein coding gene prostaglandin I2 (prostacyclin) synthase
Tssr27755 2 167221333 to 167221385 52 - TSS region transcription start site region 27755
Cpgi12735 2 167240084 to 167240732 648 CpG island CpG island 12735
Tssr27756 2 167240534 to 167240577 43 - TSS region transcription start site region 27756
Tssr27757 2 167240588 to 167240610 22 - TSS region transcription start site region 27757
Gm46778 2 167249571 to 167252791 3220 - lncRNA gene predicted gene, 46778
Tssr27758 2 167252119 to 167252141 22 - TSS region transcription start site region 27758
Cpgi12736 2 167280667 to 167280935 268 CpG island CpG island 12736
Gm11473 2 167281419 to 167281777 358 - pseudogene predicted gene 11473
B4galt5 2 167298444 to 167349178 50734 - protein coding gene UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5
Cpgi12737 2 167299351 to 167299622 271 CpG island CpG island 12737
Tssr27759 2 167299717 to 167299734 17 - TSS region transcription start site region 27759
Tssr27760 2 167300775 to 167300779 4 - TSS region transcription start site region 27760
Tssr27761 2 167300903 to 167300917 14 - TSS region transcription start site region 27761
Tssr27762 2 167301478 to 167301487 9 - TSS region transcription start site region 27762
Tssr27763 2 167302211 to 167302221 10 - TSS region transcription start site region 27763
Tssr27764 2 167309296 to 167309306 10 - TSS region transcription start site region 27764
Tssr27765 2 167313166 to 167313178 12 - TSS region transcription start site region 27765
2010003K10Rik 2 167322578 to 167324110 1532 unclassified gene RIKEN cDNA 2010003K10 gene
Tssr27766 2 167339386 to 167339392 6 - TSS region transcription start site region 27766
Cpgi12738 2 167348358 to 167349943 1585 CpG island CpG island 12738
Tssr27767 2 167349111 to 167349122 11 - TSS region transcription start site region 27767
Tssr27768 2 167349142 to 167349157 15 - TSS region transcription start site region 27768
Tssr767 2 167349158 to 167349163 5 - TSS region transcription start site region 767
Tssr27769 2 167349167 to 167349249 82 - TSS region transcription start site region 27769
Tssr27770 2 167349343 to 167349371 28 - TSS region transcription start site region 27770
Tssr21794 2 167349674 to 167349715 41 + TSS region transcription start site region 21794
Tssr21795 2 167349720 to 167349735 15 + TSS region transcription start site region 21795
Tssr27771 2 167358382 to 167358395 13 - TSS region transcription start site region 27771
Tssr21796 2 167358882 to 167358909 27 + TSS region transcription start site region 21796
Tssr21797 2 167358917 to 167358945 28 + TSS region transcription start site region 21797
Tssr21798 2 167358970 to 167358983 13 + TSS region transcription start site region 21798
Tssr21799 2 167363584 to 167363588 4 + TSS region transcription start site region 21799
Tssr21800 2 167363612 to 167363652 40 + TSS region transcription start site region 21800