Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:166705588-166998052

41 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Prex1	2	166566345 to 166713832	147487	-	protein coding gene	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
Cpgi12723	2	166712801 to 166714627	1826		CpG island	CpG island 12723
Tssr27709	2	166713732 to 166713743	11	-	TSS region	transcription start site region 27709
Tssr27710	2	166713758 to 166713827	69	-	TSS region	transcription start site region 27710
Gm46777	2	166713915 to 166726737	12822	+	lncRNA gene	predicted gene, 46777
Tssr21773	2	166714101 to 166714116	15	+	TSS region	transcription start site region 21773
Gm31117	2	166756408 to 166766054	9646	-	lncRNA gene	predicted gene, 31117
Gm24477	2	166768745 to 166768847	102	+	snRNA gene	predicted gene, 24477
Cpgi12724	2	166786212 to 166787026	814		CpG island	CpG island 12724
Tssr27711	2	166786753 to 166786792	39	-	TSS region	transcription start site region 27711
Trp53rkb	2	166792518 to 166799492	6974	+	protein coding gene	transformation related protein 53 regulating kinase B
Tssr21774	2	166792525 to 166792536	11	+	TSS region	transcription start site region 21774
Cpgi12725	2	166793514 to 166794304	790		CpG island	CpG island 12725
Tssr21775	2	166793784 to 166793813	29	+	TSS region	transcription start site region 21775
Cpgi12726	2	166805231 to 166806214	983		CpG island	CpG island 12726
Tssr21776	2	166805506 to 166805605	99	+	TSS region	transcription start site region 21776
Arfgef2	2	166805588 to 166898052	92464	+	protein coding gene	ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
Tssr21777	2	166805644 to 166805653	9	+	TSS region	transcription start site region 21777
Tssr27712	2	166821383 to 166821385	2	-	TSS region	transcription start site region 27712
Tssr27713	2	166825111 to 166825118	7	-	TSS region	transcription start site region 27713
Tssr766	2	166825128 to 166825137	9	-	TSS region	transcription start site region 766
Tssr21778	2	166825283 to 166825290	7	+	TSS region	transcription start site region 21778
Tssr21779	2	166827069 to 166827072	3	+	TSS region	transcription start site region 21779
Gm31204	2	166898425 to 166905922	7497	-	lncRNA gene	predicted gene, 31204
Tssr27714	2	166904533 to 166904538	5	-	TSS region	transcription start site region 27714
Cpgi12727	2	166905690 to 166906874	1184		CpG island	CpG island 12727
Tssr27715	2	166905851 to 166905874	23	-	TSS region	transcription start site region 27715
Tssr27716	2	166905881 to 166905909	28	-	TSS region	transcription start site region 27716
Tssr21780	2	166906026 to 166906099	73	+	TSS region	transcription start site region 21780
Cse1l	2	166906048 to 166946389	40341	+	protein coding gene	chromosome segregation 1-like (S. cerevisiae)
Tssr21781	2	166906449 to 166906486	37	+	TSS region	transcription start site region 21781
Tssr21782	2	166937374 to 166937389	15	+	TSS region	transcription start site region 21782
Gm17096	2	166943539 to 166944308	769	+	antisense lncRNA gene	predicted gene 17096
Stau1	2	166947549 to 166996299	48750	-	protein coding gene	staufen double-stranded RNA binding protein 1
Tssr27717	2	166950895 to 166950909	14	-	TSS region	transcription start site region 27717
Cpgi12728	2	166995250 to 166996621	1371		CpG island	CpG island 12728
Tssr27718	2	166996098 to 166996109	11	-	TSS region	transcription start site region 27718
Tssr27719	2	166996147 to 166996158	11	-	TSS region	transcription start site region 27719
Tssr27720	2	166996206 to 166996220	14	-	TSS region	transcription start site region 27720
Tssr27721	2	166996221 to 166996256	35	-	TSS region	transcription start site region 27721
Tssr27722	2	166996259 to 166996283	24	-	TSS region	transcription start site region 27722