Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:165979793-166400862

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81 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Platr29 2 165973318 to 165981656 8338 - lincRNA gene pluripotency associated transcript 29
Gm11464 2 165980726 to 165992517 11791 - lincRNA gene predicted gene 11464
Tssr27665 2 165982581 to 165982615 34 - TSS region transcription start site region 27665
Tssr27666 2 165983084 to 165983115 31 - TSS region transcription start site region 27666
Tssr21747 2 165983373 to 165983377 4 + TSS region transcription start site region 21747
Cpgi12717 2 165986967 to 165987251 284 CpG island CpG island 12717
Cpgi12718 2 165992124 to 165993722 1598 CpG island CpG island 12718
Tssr21748 2 165992608 to 165992619 11 + TSS region transcription start site region 21748
Tssr21749 2 165992625 to 165992667 42 + TSS region transcription start site region 21749
Ncoa3 2 165992636 to 166073242 80606 + protein coding gene nuclear receptor coactivator 3
Tssr21750 2 165992678 to 165992687 9 + TSS region transcription start site region 21750
Tssr21751 2 165992715 to 165992726 11 + TSS region transcription start site region 21751
Tssr27667 2 165993729 to 165993743 14 - TSS region transcription start site region 27667
Tssr21752 2 165997388 to 165997410 22 + TSS region transcription start site region 21752
Tssr21753 2 166003304 to 166003325 21 + TSS region transcription start site region 21753
Tssr21754 2 166009616 to 166009622 6 + TSS region transcription start site region 21754
Tssr21755 2 166012933 to 166012946 13 + TSS region transcription start site region 21755
Tssr21756 2 166016249 to 166016254 5 + TSS region transcription start site region 21756
Tssr21757 2 166020292 to 166020295 3 + TSS region transcription start site region 21757
Tssr21758 2 166035507 to 166035523 16 + TSS region transcription start site region 21758
Tssr21759 2 166059186 to 166059220 34 + TSS region transcription start site region 21759
Tssr21760 2 166059312 to 166059328 16 + TSS region transcription start site region 21760
Tssr21761 2 166068749 to 166068753 4 + TSS region transcription start site region 21761
Tssr21762 2 166069045 to 166069048 3 + TSS region transcription start site region 21762
Tssr21763 2 166072201 to 166072223 22 + TSS region transcription start site region 21763
Tssr21764 2 166072547 to 166072548 1 + TSS region transcription start site region 21764
Sulf2 2 166073899 to 166155683 81784 - protein coding gene sulfatase 2
Tssr27668 2 166074442 to 166074463 21 - TSS region transcription start site region 27668
Tssr21765 2 166080714 to 166080725 11 + TSS region transcription start site region 21765
Tssr21766 2 166080748 to 166080759 11 + TSS region transcription start site region 21766
Tssr27669 2 166081027 to 166081064 37 - TSS region transcription start site region 27669
Tssr27670 2 166083565 to 166083576 11 - TSS region transcription start site region 27670
Tssr27671 2 166117052 to 166117071 19 - TSS region transcription start site region 27671
Tssr763 2 166117060 to 166117068 8 + TSS region transcription start site region 763
Tssr27672 2 166132678 to 166132705 27 - TSS region transcription start site region 27672
Tssr21767 2 166153995 to 166154036 41 + TSS region transcription start site region 21767
Cpgi12719 2 166154007 to 166155897 1890 CpG island CpG island 12719
Tssr27673 2 166154796 to 166154859 63 - TSS region transcription start site region 27673
Tssr27674 2 166154998 to 166155055 57 - TSS region transcription start site region 27674
Tssr27675 2 166155069 to 166155080 11 - TSS region transcription start site region 27675
Tssr27676 2 166155104 to 166155133 29 - TSS region transcription start site region 27676
Tssr27677 2 166155135 to 166155162 27 - TSS region transcription start site region 27677
Tssr27678 2 166155165 to 166155176 11 - TSS region transcription start site region 27678
Tssr27679 2 166155177 to 166155188 11 - TSS region transcription start site region 27679
Tssr27680 2 166155242 to 166155251 9 - TSS region transcription start site region 27680
Tssr27681 2 166155272 to 166155286 14 - TSS region transcription start site region 27681
Tssr27682 2 166155326 to 166155338 12 - TSS region transcription start site region 27682
Tssr27683 2 166155375 to 166155380 5 - TSS region transcription start site region 27683
Tssr27684 2 166155449 to 166155460 11 - TSS region transcription start site region 27684
Tssr27685 2 166155494 to 166155517 23 - TSS region transcription start site region 27685
Tssr27686 2 166155548 to 166155559 11 - TSS region transcription start site region 27686
Tssr27687 2 166155581 to 166155621 40 - TSS region transcription start site region 27687
Tssr27688 2 166155624 to 166155671 47 - TSS region transcription start site region 27688
Tssr27689 2 166155695 to 166155706 11 - TSS region transcription start site region 27689
Tssr27690 2 166155729 to 166155734 5 - TSS region transcription start site region 27690
Tssr27691 2 166155811 to 166155843 32 - TSS region transcription start site region 27691
Tssr27692 2 166156139 to 166156152 13 - TSS region transcription start site region 27692
Tssr27693 2 166156168 to 166156180 12 - TSS region transcription start site region 27693
Tssr27694 2 166156187 to 166156198 11 - TSS region transcription start site region 27694
Tssr27695 2 166156284 to 166156317 33 - TSS region transcription start site region 27695
Tssr21768 2 166156475 to 166156514 39 + TSS region transcription start site region 21768
Tssr27696 2 166158186 to 166158220 34 - TSS region transcription start site region 27696
Gm30320 2 166162433 to 166182737 20304 + lncRNA gene predicted gene, 30320
Gm22687 2 166189697 to 166189801 104 + rRNA gene predicted gene, 22687
Gm11466 2 166189793 to 166190862 1069 - lincRNA gene predicted gene 11466
Tssr21769 2 166194233 to 166194279 46 + TSS region transcription start site region 21769
Tssr27697 2 166194315 to 166194346 31 - TSS region transcription start site region 27697
Gm30536 2 166194537 to 166201418 6881 + lncRNA gene predicted gene, 30536
Gm11467 2 166207230 to 166208627 1397 - lincRNA gene predicted gene 11467
Gm11468 2 166273908 to 166294831 20923 + lincRNA gene predicted gene 11468
Tssr764 2 166274497 to 166274498 1 + TSS region transcription start site region 764
D2Mit24 2 166276765 to 166276940 175 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 24
Gm30733 2 166277734 to 166286589 8855 - protein coding gene predicted gene, 30733
D2Mit172 2 166296970 to 166297074 104 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 172
D2Dcr127 2 166332773 to 166332869 96 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 127
D2Mit53 2 166367834 to 166367981 147 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 53
Gm14268 2 166380828 to 166398187 17359 - lincRNA gene predicted gene 14268
Gct8 2 166394987 to 166395130 143 QTL granulosa cell tumorigenesis 8
D2Mit145 2 166394987 to 166395130 143 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 145
Tssr27698 2 166398124 to 166398143 19 - TSS region transcription start site region 27698
Tssr27699 2 166398238 to 166398275 37 - TSS region transcription start site region 27699