MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:165957009-165997015

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm11462	2	165959789 to 165960350	561	+	pseudogene	predicted gene 11462
Tssr21744	2	165969099 to 165969112	13	+	TSS region	transcription start site region 21744
Tssr21745	2	165969661 to 165969688	27	+	TSS region	transcription start site region 21745
Platr29	2	165973318 to 165981656	8338	-	lincRNA gene	pluripotency associated transcript 29
Tssr27664	2	165977009 to 165977015	6	-	TSS region	transcription start site region 27664
Tssr21746	2	165977141 to 165977160	19	+	TSS region	transcription start site region 21746
Gm11464	2	165980726 to 165992517	11791	-	lincRNA gene	predicted gene 11464
Tssr27665	2	165982581 to 165982615	34	-	TSS region	transcription start site region 27665
Tssr27666	2	165983084 to 165983115	31	-	TSS region	transcription start site region 27666
Tssr21747	2	165983373 to 165983377	4	+	TSS region	transcription start site region 21747
Cpgi12717	2	165986967 to 165987251	284		CpG island	CpG island 12717
Cpgi12718	2	165992124 to 165993722	1598		CpG island	CpG island 12718
Tssr21748	2	165992608 to 165992619	11	+	TSS region	transcription start site region 21748
Tssr21749	2	165992625 to 165992667	42	+	TSS region	transcription start site region 21749
Ncoa3	2	165992636 to 166073242	80606	+	protein coding gene	nuclear receptor coactivator 3
Tssr21750	2	165992678 to 165992687	9	+	TSS region	transcription start site region 21750
Tssr21751	2	165992715 to 165992726	11	+	TSS region	transcription start site region 21751
Tssr27667	2	165993729 to 165993743	14	-	TSS region	transcription start site region 27667