Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:165390009-165800080

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ocstamp 2 165395450 to 165400394 4944 - protein coding gene osteoclast stimulatory transmembrane protein
Cpgi12705 2 165395616 to 165396324 708 CpG island CpG island 12705
Bwq12 2 165396284 to 165396284 0 QTL body weight QTL 12
Cpgi12706 2 165397392 to 165397885 493 CpG island CpG island 12706
Cpgi12707 2 165399543 to 165399706 163 CpG island CpG island 12707
Tssr27624 2 165400367 to 165400386 19 - TSS region transcription start site region 27624
Tssr27625 2 165400398 to 165400410 12 - TSS region transcription start site region 27625
Slc13a3 2 165405295 to 165473197 67902 - protein coding gene solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
Tssr27626 2 165407797 to 165407811 14 - TSS region transcription start site region 27626
Gm14437 2 165442264 to 165450485 8221 + antisense lncRNA gene predicted gene 14437
D2Mit288 2 165447193 to 165447391 198 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 288
Cpgi12708 2 165472808 to 165473679 871 CpG island CpG island 12708
Tssr27627 2 165473187 to 165473202 15 - TSS region transcription start site region 27627
D2Dcr126 2 165474449 to 165474545 96 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 126
Trp53rka 2 165490112 to 165493314 3202 - protein coding gene transformation related protein 53 regulating kinase A
Cpgi12709 2 165492691 to 165493932 1241 CpG island CpG island 12709
Tssr27628 2 165493298 to 165493330 32 - TSS region transcription start site region 27628
Cpgi12710 2 165503592 to 165504099 507 CpG island CpG island 12710
Tssr21725 2 165503894 to 165503913 19 + TSS region transcription start site region 21725
Slc2a10 2 165503897 to 165519917 16020 + protein coding gene solute carrier family 2 (facilitated glucose transporter), member 10
D2Mit289 2 165519743 to 165519871 128 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 289
Tssr21726 2 165530116 to 165530119 3 + TSS region transcription start site region 21726
Cpgi12711 2 165547183 to 165547457 274 CpG island CpG island 12711
Cpgi12712 2 165563160 to 165563932 772 CpG island CpG island 12712
Cpgi12713 2 165594604 to 165595835 1231 CpG island CpG island 12713
Tssr21727 2 165595009 to 165595080 71 + TSS region transcription start site region 21727
Eya2 2 165595032 to 165771727 176695 + protein coding gene EYA transcriptional coactivator and phosphatase 2
Tssr21728 2 165596171 to 165596172 1 + TSS region transcription start site region 21728
Gm28163 2 165601463 to 165601787 324 - lincRNA gene predicted gene 28163
Tssr21729 2 165601790 to 165601835 45 + TSS region transcription start site region 21729
2310061G22Rik 2 165613017 to 165614435 1418 unclassified gene RIKEN cDNA 2310061G22 gene
Tssr21730 2 165655237 to 165655317 80 + TSS region transcription start site region 21730
Tssr21731 2 165655320 to 165655351 31 + TSS region transcription start site region 21731
Gm11460 2 165666497 to 165666857 360 - pseudogene predicted gene 11460
Tssr27629 2 165717586 to 165717591 5 - TSS region transcription start site region 27629
Gm29993 2 165727597 to 165731567 3970 - lncRNA gene predicted gene, 29993
Tssr21732 2 165730084 to 165730096 12 + TSS region transcription start site region 21732
Cpgi12714 2 165742249 to 165742566 317 CpG island CpG island 12714
Zmynd8 2 165784152 to 165898981 114829 - protein coding gene zinc finger, MYND-type containing 8
Tssr761 2 165792813 to 165792816 3 - TSS region transcription start site region 761
Tssr27630 2 165792843 to 165792855 12 - TSS region transcription start site region 27630
Tssr27631 2 165792861 to 165792875 14 - TSS region transcription start site region 27631
Tssr762 2 165793325 to 165793332 7 - TSS region transcription start site region 762
Tssr27632 2 165793336 to 165793362 26 - TSS region transcription start site region 27632
Tssr27633 2 165793371 to 165793380 9 - TSS region transcription start site region 27633