Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:165070020-165356904

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cd40 2 165055608 to 165071654 16046 + protein coding gene CD40 antigen
Tssr21723 2 165072463 to 165072466 3 + TSS region transcription start site region 21723
1700025C18Rik 2 165078693 to 165090750 12057 - protein coding gene RIKEN cDNA 1700025C18 gene
Tssr21724 2 165081757 to 165081773 16 + TSS region transcription start site region 21724
Tssr27604 2 165090739 to 165090752 13 - TSS region transcription start site region 27604
Gm36690 2 165105715 to 165107334 1619 + lncRNA gene predicted gene, 36690
Cpgi12689 2 165106681 to 165107057 376 CpG island CpG island 12689
Cdh22 2 165111507 to 165234853 123346 - protein coding gene cadherin 22
Cpgi12690 2 165111679 to 165112842 1163 CpG island CpG island 12690
Cpgi12691 2 165116162 to 165116505 343 CpG island CpG island 12691
Tssr27605 2 165135445 to 165135454 9 - TSS region transcription start site region 27605
Cpgi12692 2 165141731 to 165142465 734 CpG island CpG island 12692
Gm14397 2 165159412 to 165163969 4557 + antisense lncRNA gene predicted gene 14397
Cpgi12693 2 165180983 to 165181294 311 CpG island CpG island 12693
Cpgi12694 2 165195614 to 165195984 370 CpG island CpG island 12694
Cpgi12695 2 165202086 to 165202257 171 CpG island CpG island 12695
Gm36803 2 165210020 to 165216904 6884 + protein coding gene predicted gene, 36803
Cpgi12696 2 165215680 to 165215857 177 CpG island CpG island 12696
Gm36748 2 165220151 to 165231837 11686 + lncRNA gene predicted gene, 36748
Cpgi12697 2 165233266 to 165235395 2129 CpG island CpG island 12697
Tssr27606 2 165234658 to 165234681 23 - TSS region transcription start site region 27606
Tssr27607 2 165234689 to 165234750 61 - TSS region transcription start site region 27607
Gm25569 2 165270046 to 165270176 130 - snoRNA gene predicted gene, 25569
Slc35c2 2 165276554 to 165287869 11315 - protein coding gene solute carrier family 35, member C2
Tssr27608 2 165283599 to 165283620 21 - TSS region transcription start site region 27608
Tssr27609 2 165283648 to 165283655 7 - TSS region transcription start site region 27609
Tssr27610 2 165283656 to 165283683 27 - TSS region transcription start site region 27610
Tssr27611 2 165283711 to 165283725 14 - TSS region transcription start site region 27611
Tssr27612 2 165283768 to 165283789 21 - TSS region transcription start site region 27612
Tssr27613 2 165286543 to 165286560 17 - TSS region transcription start site region 27613
Tssr27614 2 165286913 to 165286933 20 - TSS region transcription start site region 27614
Cpgi12698 2 165287308 to 165287976 668 CpG island CpG island 12698
Tssr27615 2 165287802 to 165287845 43 - TSS region transcription start site region 27615
Tssr27616 2 165287853 to 165287863 10 - TSS region transcription start site region 27616
Elmo2 2 165288031 to 165326479 38448 - protein coding gene engulfment and cell motility 2
Tssr27617 2 165297451 to 165297485 34 - TSS region transcription start site region 27617
Cpgi12699 2 165311522 to 165311784 262 CpG island CpG island 12699
Cpgi12700 2 165325777 to 165327202 1425 CpG island CpG island 12700
Tssr27618 2 165326435 to 165326486 51 - TSS region transcription start site region 27618
Zfp663 2 165351297 to 165368729 17432 - protein coding gene zinc finger protein 663