MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:165004821-165064859

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ncoa5	2	165000357 to 165034867	34510	-	protein coding gene	nuclear receptor coactivator 5
Gm19133	2	165004892 to 165006988	2096	-	pseudogene	predicted gene, 19133
Cpgi12687	2	165033725 to 165035139	1414		CpG island	CpG island 12687
Tssr27599	2	165034456 to 165034488	32	-	TSS region	transcription start site region 27599
Tssr27600	2	165034528 to 165034578	50	-	TSS region	transcription start site region 27600
Tssr27601	2	165034770 to 165034820	50	-	TSS region	transcription start site region 27601
Tssr27602	2	165034821 to 165034859	38	-	TSS region	transcription start site region 27602
Cpgi12688	2	165055599 to 165055761	162		CpG island	CpG island 12688
Cd40	2	165055608 to 165071654	16046	+	protein coding gene	CD40 antigen
Tssr21701	2	165055625 to 165055661	36	+	TSS region	transcription start site region 21701
Tssr21702	2	165055668 to 165055690	22	+	TSS region	transcription start site region 21702
Tssr21703	2	165058259 to 165058270	11	+	TSS region	transcription start site region 21703
Tssr21704	2	165059291 to 165059304	13	+	TSS region	transcription start site region 21704
Tssr21705	2	165059922 to 165059931	9	+	TSS region	transcription start site region 21705
Tssr21706	2	165062311 to 165062320	9	+	TSS region	transcription start site region 21706
Tssr21707	2	165063557 to 165063569	12	+	TSS region	transcription start site region 21707
Tssr21708	2	165064136 to 165064163	27	+	TSS region	transcription start site region 21708
Tssr21709	2	165064194 to 165064205	11	+	TSS region	transcription start site region 21709