Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:164881889-164942932

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930445K14Rik 2 164878287 to 164883451 5164 - protein coding gene RIKEN cDNA 4930445K14 gene
Pcif1 2 164879368 to 164891437 12069 + protein coding gene PDX1 C-terminal inhibiting factor 1
Gm46775 2 164887299 to 164891156 3857 - lncRNA gene predicted gene, 46775
Zfp335 2 164891892 to 164911750 19858 - protein coding gene zinc finger protein 335
Cpgi12677 2 164910494 to 164912365 1871 CpG island CpG island 12677
Tssr27593 2 164911175 to 164911210 35 - TSS region transcription start site region 27593
Tssr27594 2 164911218 to 164911239 21 - TSS region transcription start site region 27594
Tssr27595 2 164911258 to 164911299 41 - TSS region transcription start site region 27595
Zfp335os 2 164911354 to 164919953 8599 + antisense lncRNA gene zinc finger protein 335, opposite strand
Tssr21686 2 164911427 to 164911455 28 + TSS region transcription start site region 21686
Tssr27596 2 164911560 to 164911583 23 - TSS region transcription start site region 27596
Tssr27597 2 164911586 to 164911608 22 - TSS region transcription start site region 27597
2210414I22Rik 2 164911889 to 164912932 1043 unclassified gene RIKEN cDNA 2210414I22 gene
Cpgi12678 2 164938440 to 164938976 536 CpG island CpG island 12678
Tssr21687 2 164940742 to 164940765 23 + TSS region transcription start site region 21687
Mmp9 2 164940780 to 164955850 15070 + protein coding gene matrix metallopeptidase 9