Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:164854358-164904398

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pltp 2 164839518 to 164857708 18190 - protein coding gene phospholipid transfer protein
Tssr27578 2 164854399 to 164854424 25 - TSS region transcription start site region 27578
Tssr27579 2 164854973 to 164855061 88 - TSS region transcription start site region 27579
Tssr27580 2 164855735 to 164855746 11 - TSS region transcription start site region 27580
Cpgi12675 2 164856721 to 164858034 1313 CpG island CpG island 12675
Tssr27581 2 164856724 to 164856806 82 - TSS region transcription start site region 27581
Tssr27582 2 164856907 to 164856954 47 - TSS region transcription start site region 27582
Tssr27583 2 164856957 to 164857024 67 - TSS region transcription start site region 27583
Tssr27584 2 164857166 to 164857182 16 - TSS region transcription start site region 27584
Tssr27585 2 164857198 to 164857239 41 - TSS region transcription start site region 27585
Tssr27586 2 164857240 to 164857273 33 - TSS region transcription start site region 27586
Tssr27587 2 164857634 to 164857652 18 - TSS region transcription start site region 27587
Tssr27588 2 164857671 to 164857682 11 - TSS region transcription start site region 27588
Tssr21682 2 164857769 to 164857803 34 + TSS region transcription start site region 21682
Tssr27589 2 164857803 to 164857823 20 - TSS region transcription start site region 27589
Tssr27590 2 164858178 to 164858204 26 - TSS region transcription start site region 27590
Tssr27591 2 164859807 to 164859813 6 - TSS region transcription start site region 27591
D2Mit227 2 164869474 to 164869584 110 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 227
D2Mit342 2 164869485 to 164869576 91 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 342
4930445K14Rik 2 164878287 to 164883451 5164 - protein coding gene RIKEN cDNA 4930445K14 gene
Cpgi12676 2 164878731 to 164880313 1582 CpG island CpG island 12676
Tssr21683 2 164879358 to 164879398 40 + TSS region transcription start site region 21683
Pcif1 2 164879368 to 164891437 12069 + protein coding gene PDX1 C-terminal inhibiting factor 1
Tssr27592 2 164879735 to 164879804 69 - TSS region transcription start site region 27592
Tssr21684 2 164880016 to 164880039 23 + TSS region transcription start site region 21684
Tssr21685 2 164880045 to 164880061 16 + TSS region transcription start site region 21685
Gm46775 2 164887299 to 164891156 3857 - lncRNA gene predicted gene, 46775
Zfp335 2 164891892 to 164911750 19858 - protein coding gene zinc finger protein 335