Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:164778627-164828631

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tnnc2 2 164777161 to 164779734 2573 - protein coding gene troponin C2, fast
Tssr27536 2 164779721 to 164779740 19 - TSS region transcription start site region 27536
Cpgi12670 2 164785483 to 164786601 1118 CpG island CpG island 12670
Snx21 2 164785823 to 164793816 7993 + protein coding gene sorting nexin family member 21
Tssr21649 2 164785957 to 164785989 32 + TSS region transcription start site region 21649
Tssr21650 2 164785994 to 164786071 77 + TSS region transcription start site region 21650
Cpgi12671 2 164791728 to 164791961 233 CpG island CpG island 12671
Acot8 2 164792765 to 164804882 12117 - protein coding gene acyl-CoA thioesterase 8
Tssr27537 2 164803627 to 164803631 4 - TSS region transcription start site region 27537
Cpgi12672 2 164804544 to 164805721 1177 CpG island CpG island 12672
Tssr27538 2 164804686 to 164804733 47 - TSS region transcription start site region 27538
Tssr27539 2 164804824 to 164804837 13 - TSS region transcription start site region 27539
Tssr27540 2 164804848 to 164804863 15 - TSS region transcription start site region 27540
Tssr27541 2 164804876 to 164804894 18 - TSS region transcription start site region 27541
Tssr21651 2 164805082 to 164805109 27 + TSS region transcription start site region 21651
Zswim3 2 164805114 to 164822127 17013 + protein coding gene zinc finger SWIM-type containing 3
Tssr27542 2 164805194 to 164805203 9 - TSS region transcription start site region 27542
Tssr21652 2 164805237 to 164805270 33 + TSS region transcription start site region 21652
Tssr27543 2 164821095 to 164821109 14 - TSS region transcription start site region 27543
Zswim1 2 164822686 to 164826867 4181 + protein coding gene zinc finger SWIM-type containing 1
Cpgi12673 2 164822780 to 164823294 514 CpG island CpG island 12673
Tssr21653 2 164822961 to 164822975 14 + TSS region transcription start site region 21653
Tssr21654 2 164823001 to 164823040 39 + TSS region transcription start site region 21654
Tssr21655 2 164823059 to 164823072 13 + TSS region transcription start site region 21655
Spata25 2 164827382 to 164828534 1152 - protein coding gene spermatogenesis associated 25
Tssr27544 2 164828479 to 164828499 20 - TSS region transcription start site region 27544
Tssr27545 2 164828529 to 164828537 8 - TSS region transcription start site region 27545