Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:164655577-164836664

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102 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Wfdc9 2 164649631 to 164656583 6952 - protein coding gene WAP four-disulfide core domain 9
Tssr21626 2 164656043 to 164656113 70 + TSS region transcription start site region 21626
Wfdc10 2 164656046 to 164657368 1322 + protein coding gene WAP four-disulfide core domain 10
Tssr27518 2 164657187 to 164657197 10 - TSS region transcription start site region 27518
Wfdc11 2 164662894 to 164674087 11193 - protein coding gene WAP four-disulfide core domain 11
Tssr27519 2 164674072 to 164674080 8 - TSS region transcription start site region 27519
Tssr27520 2 164674081 to 164674095 14 - TSS region transcription start site region 27520
Tssr27521 2 164674113 to 164674114 1 - TSS region transcription start site region 27521
Tssr21627 2 164685051 to 164685056 5 + TSS region transcription start site region 21627
Tssr21628 2 164685080 to 164685152 72 + TSS region transcription start site region 21628
Wfdc13 2 164685107 to 164687706 2599 + protein coding gene WAP four-disulfide core domain 13
Tssr21629 2 164687328 to 164687335 7 + TSS region transcription start site region 21629
Tssr21630 2 164687338 to 164687342 4 + TSS region transcription start site region 21630
Spint4 2 164698501 to 164702448 3947 + protein coding gene serine protease inhibitor, Kunitz type 4
Tssr21631 2 164698524 to 164698539 15 + TSS region transcription start site region 21631
Tssr21632 2 164715269 to 164715284 15 + TSS region transcription start site region 21632
Tssr21633 2 164715299 to 164715310 11 + TSS region transcription start site region 21633
Spint5 2 164715305 to 164718068 2763 + protein coding gene serine protease inhibitor, Kunitz type 5
Tssr21634 2 164715321 to 164715333 12 + TSS region transcription start site region 21634
Wfdc3 2 164731226 to 164745910 14684 - protein coding gene WAP four-disulfide core domain 3
Tssr27522 2 164743099 to 164743108 9 - TSS region transcription start site region 27522
Tssr27523 2 164743113 to 164743124 11 - TSS region transcription start site region 27523
Tssr27524 2 164743132 to 164743147 15 - TSS region transcription start site region 27524
Tssr27525 2 164743155 to 164743181 26 - TSS region transcription start site region 27525
Tssr27526 2 164743182 to 164743211 29 - TSS region transcription start site region 27526
Cpgi12667 2 164745577 to 164746664 1087 CpG island CpG island 12667
Tssr27527 2 164745896 to 164745914 18 - TSS region transcription start site region 27527
Tssr27528 2 164745916 to 164745940 24 - TSS region transcription start site region 27528
Tssr21635 2 164745979 to 164746025 46 + TSS region transcription start site region 21635
Dnttip1 2 164746015 to 164768220 22205 + protein coding gene deoxynucleotidyltransferase, terminal, interacting protein 1
Tssr21636 2 164746028 to 164746039 11 + TSS region transcription start site region 21636
Gm11457 2 164750082 to 164762877 12795 - antisense lncRNA gene predicted gene 11457
Gm22596 2 164761659 to 164761974 315 + unclassified non-coding RNA gene predicted gene, 22596
Cpgi12668 2 164769399 to 164770661 1262 CpG island CpG island 12668
Tssr27529 2 164769642 to 164769655 13 - TSS region transcription start site region 27529
Tssr21637 2 164769892 to 164769903 11 + TSS region transcription start site region 21637
Tssr21638 2 164769921 to 164769954 33 + TSS region transcription start site region 21638
Ube2c 2 164769929 to 164772902 2973 + protein coding gene ubiquitin-conjugating enzyme E2C
Tssr21639 2 164769963 to 164769974 11 + TSS region transcription start site region 21639
Tssr21640 2 164771301 to 164771324 23 + TSS region transcription start site region 21640
Tssr21641 2 164771686 to 164771697 11 + TSS region transcription start site region 21641
Tssr21642 2 164771862 to 164771879 17 + TSS region transcription start site region 21642
Tssr21643 2 164771894 to 164771903 9 + TSS region transcription start site region 21643
Cpgi12669 2 164776904 to 164777396 492 CpG island CpG island 12669
Tnnc2 2 164777161 to 164779734 2573 - protein coding gene troponin C2, fast
Tssr21644 2 164777485 to 164777510 25 + TSS region transcription start site region 21644
Tssr21645 2 164777519 to 164777534 15 + TSS region transcription start site region 21645
Tssr21646 2 164777557 to 164777583 26 + TSS region transcription start site region 21646
Tssr21647 2 164777742 to 164777781 39 + TSS region transcription start site region 21647
Tssr27530 2 164777807 to 164777819 12 - TSS region transcription start site region 27530
Tssr760 2 164777821 to 164777849 28 - TSS region transcription start site region 760
Tssr21648 2 164777942 to 164777965 23 + TSS region transcription start site region 21648
Tssr27531 2 164777973 to 164777984 11 - TSS region transcription start site region 27531
Tssr27532 2 164777991 to 164778015 24 - TSS region transcription start site region 27532
Tssr27533 2 164778035 to 164778053 18 - TSS region transcription start site region 27533
Tssr27534 2 164778076 to 164778087 11 - TSS region transcription start site region 27534
Tssr27535 2 164778206 to 164778228 22 - TSS region transcription start site region 27535
Tssr27536 2 164779721 to 164779740 19 - TSS region transcription start site region 27536
Cpgi12670 2 164785483 to 164786601 1118 CpG island CpG island 12670
Snx21 2 164785823 to 164793816 7993 + protein coding gene sorting nexin family member 21
Tssr21649 2 164785957 to 164785989 32 + TSS region transcription start site region 21649
Tssr21650 2 164785994 to 164786071 77 + TSS region transcription start site region 21650
Cpgi12671 2 164791728 to 164791961 233 CpG island CpG island 12671
Acot8 2 164792765 to 164804882 12117 - protein coding gene acyl-CoA thioesterase 8
Tssr27537 2 164803627 to 164803631 4 - TSS region transcription start site region 27537
Cpgi12672 2 164804544 to 164805721 1177 CpG island CpG island 12672
Tssr27538 2 164804686 to 164804733 47 - TSS region transcription start site region 27538
Tssr27539 2 164804824 to 164804837 13 - TSS region transcription start site region 27539
Tssr27540 2 164804848 to 164804863 15 - TSS region transcription start site region 27540
Tssr27541 2 164804876 to 164804894 18 - TSS region transcription start site region 27541
Tssr21651 2 164805082 to 164805109 27 + TSS region transcription start site region 21651
Zswim3 2 164805114 to 164822127 17013 + protein coding gene zinc finger SWIM-type containing 3
Tssr27542 2 164805194 to 164805203 9 - TSS region transcription start site region 27542
Tssr21652 2 164805237 to 164805270 33 + TSS region transcription start site region 21652
Tssr27543 2 164821095 to 164821109 14 - TSS region transcription start site region 27543
Zswim1 2 164822686 to 164826867 4181 + protein coding gene zinc finger SWIM-type containing 1
Cpgi12673 2 164822780 to 164823294 514 CpG island CpG island 12673
Tssr21653 2 164822961 to 164822975 14 + TSS region transcription start site region 21653
Tssr21654 2 164823001 to 164823040 39 + TSS region transcription start site region 21654
Tssr21655 2 164823059 to 164823072 13 + TSS region transcription start site region 21655
Spata25 2 164827382 to 164828534 1152 - protein coding gene spermatogenesis associated 25
Tssr27544 2 164828479 to 164828499 20 - TSS region transcription start site region 27544
Tssr27545 2 164828529 to 164828537 8 - TSS region transcription start site region 27545
Neurl2 2 164830732 to 164833456 2724 - protein coding gene neuralized E3 ubiquitin protein ligase 2
Cpgi12674 2 164832712 to 164834417 1705 CpG island CpG island 12674
Tssr21656 2 164832862 to 164832878 16 + TSS region transcription start site region 21656
Ctsa 2 164832873 to 164841032 8159 + protein coding gene cathepsin A
Tssr21657 2 164832881 to 164832935 54 + TSS region transcription start site region 21657
Tssr21658 2 164832959 to 164832970 11 + TSS region transcription start site region 21658
Tssr27546 2 164833438 to 164833480 42 - TSS region transcription start site region 27546
Tssr21659 2 164833766 to 164833775 9 + TSS region transcription start site region 21659
Tssr21660 2 164833781 to 164833812 31 + TSS region transcription start site region 21660
Tssr21661 2 164833841 to 164833852 11 + TSS region transcription start site region 21661
Tssr21662 2 164834015 to 164834048 33 + TSS region transcription start site region 21662
Tssr21663 2 164834076 to 164834097 21 + TSS region transcription start site region 21663
Tssr21664 2 164834107 to 164834138 31 + TSS region transcription start site region 21664
Tssr21665 2 164834863 to 164834884 21 + TSS region transcription start site region 21665
Tssr21666 2 164835174 to 164835199 25 + TSS region transcription start site region 21666
Tssr21667 2 164835227 to 164835280 53 + TSS region transcription start site region 21667
Tssr21668 2 164835629 to 164835651 22 + TSS region transcription start site region 21668
Tssr21669 2 164835681 to 164835692 11 + TSS region transcription start site region 21669
Tssr21670 2 164836411 to 164836458 47 + TSS region transcription start site region 21670